Glyma15g35263 - SoyBase

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Report for Sequence Feature Glyma15g35263

Feature Type:	gene_model
Chromosome:	Gm15
Start:	39858277
stop:	39859452
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Expression Patterns of Glyma15g35263

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma15g35263 not represented in the dataset	Glyma15g35263 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma15g35263

Paralog	Evidence	Comments
Glyma13g25512	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma15g35263 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.15g223300	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma15g35263

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma15g35263

Limit To All Plant Sequences

>Glyma15g35263.1   sequence type=CDS   gene model=Glyma15g35263   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAATTCCTTACGAAGTTCAATGATTGCTGTTATCTTTGCCATGACATTGATCCTTTCATATGGAGTGATTCTGTCCCAAGCTAGGACGACTCACCCTTCTTCACCCTTAGTTTCAAAAATGTCACAATCTTCTCAATCTCATTCACATTCACTTCTGCACAAAGAAGAGCACAAATCAACTCAGGAACCTGCGGTTGCCACTAGCCTTAGAAGGATACCACCTAGCAGACCGAATCCTACACAGAACAGGTTAAAGCCTAGGATCAGGGGCTAA

Predicted protein sequences of Glyma15g35263

Limit To All Plant Sequences

>Glyma15g35263.1   sequence type=predicted peptide   gene model=Glyma15g35263   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MNSLRSSMIAVIFAMTLILSYGVILSQARTTHPSSPLVSKMSQSSQSHSHSLLHKEEHKSTQEPAVATSLRRIPPSRPNPTQNRLKPRIRG*

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