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Report for Sequence Feature Glyma15g34690

Feature Type:gene_model
Chromosome:Gm15
Start:39195277
stop:39195652
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G05260AT Annotation by Michelle Graham. TAIR10: Peroxidase superfamily protein | chr1:1529827-1531271 FORWARD LENGTH=326 SoyBaseE_val: 3.00E-40ISS
GO:0006826GO-bp Annotation by Michelle Graham. GO Biological Process: iron ion transport SoyBaseN/AISS
GO:0006979GO-bp Annotation by Michelle Graham. GO Biological Process: response to oxidative stress SoyBaseN/AISS
GO:0009269GO-bp Annotation by Michelle Graham. GO Biological Process: response to desiccation SoyBaseN/AISS
GO:0009409GO-bp Annotation by Michelle Graham. GO Biological Process: response to cold SoyBaseN/AISS
GO:0010054GO-bp Annotation by Michelle Graham. GO Biological Process: trichoblast differentiation SoyBaseN/AISS
GO:0010106GO-bp Annotation by Michelle Graham. GO Biological Process: cellular response to iron ion starvation SoyBaseN/AISS
GO:0010167GO-bp Annotation by Michelle Graham. GO Biological Process: response to nitrate SoyBaseN/AISS
GO:0015706GO-bp Annotation by Michelle Graham. GO Biological Process: nitrate transport SoyBaseN/AISS
GO:0016132GO-bp Annotation by Michelle Graham. GO Biological Process: brassinosteroid biosynthetic process SoyBaseN/AISS
GO:0042538GO-bp Annotation by Michelle Graham. GO Biological Process: hyperosmotic salinity response SoyBaseN/AISS
GO:0055114GO-bp Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process SoyBaseN/AISS
GO:0005576GO-cc Annotation by Michelle Graham. GO Cellular Compartment: extracellular region SoyBaseN/AISS
GO:0005783GO-cc Annotation by Michelle Graham. GO Cellular Compartment: endoplasmic reticulum SoyBaseN/AISS
GO:0004601GO-mf Annotation by Michelle Graham. GO Molecular Function: peroxidase activity SoyBaseN/AISS
GO:0020037GO-mf Annotation by Michelle Graham. GO Molecular Function: heme binding SoyBaseN/AISS
PF00141PFAM Peroxidase JGI ISS
UniRef100_Q9ZNZ6UniRef Annotation by Michelle Graham. Most informative UniRef hit: Peroxidase (Fragment) n=1 Tax=Glycine max RepID=Q9ZNZ6_SOYBN SoyBaseE_val: 2.00E-49ISS
UniRef100_UPI000233B732UniRef Annotation by Michelle Graham. Best UniRef hit: UPI000233B732 related cluster n=1 Tax=unknown RepID=UPI000233B732 SoyBaseE_val: 4.00E-60ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma15g34690 not represented in the dataset

Glyma15g34690 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma15g34690.1   sequence type=CDS   gene model=Glyma15g34690   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CTTGGTTTTTATGTTAACAGTTGCCCAAAAATAGAGCAAATTGTTTTGAAATTTGTTCATGACCATATCCATAATGCTCCATCACTAGCAGCTGCATTAATAAGAATGCACTTTCATGACTGTTTTGTAAGGGGATGTGATGCATCAGCCCTTTTGAACTCAACAACCAATCAGGTTGAGAAGAATGCTCGTCCAAATCTTACAGTAAGAGGCTTTGACTTCATTGGCATTATAAAGAGCCTTGTTGAAGCTGAATGCCATGGTGTGGTCTCTTGA

>Glyma15g34690.1   sequence type=predicted peptide   gene model=Glyma15g34690   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
LGFYVNSCPKIEQIVLKFVHDHIHNAPSLAAALIRMHFHDCFVRGCDASALLNSTTNQVEKNARPNLTVRGFDFIGIIKSLVEAECHGVVS*







Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
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