Glyma15g33780 - SoyBase

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Report for Sequence Feature Glyma15g33780

Feature Type:	gene_model
Chromosome:	Gm15
Start:	37697259
stop:	37702003
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma15g33780

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G30993	AT	Annotation by Michelle Graham. TAIR10: Calcineurin-like metallo-phosphoesterase superfamily protein \| chr4:15098201-15099935 FORWARD LENGTH=285	SoyBase	E_val: 2.00E-44	ISS
GO:0008150	GO-bp	Annotation by Michelle Graham. GO Biological Process: biological process	SoyBase	N/A	ISS
GO:0009507	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: chloroplast	SoyBase	N/A	ISS
GO:0003674	GO-mf	Annotation by Michelle Graham. GO Molecular Function: molecular function	SoyBase	N/A	ISS
UniRef100_I1MIF4	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MIF4_SOYBN	SoyBase	E_val: 1.00E-172	ISS
UniRef100_Q8GW42	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Metallophosphatase domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=Q8GW42_ARATH	SoyBase	E_val: 1.00E-41	ISS

Expression Patterns of Glyma15g33780

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma15g33780 not represented in the dataset	Glyma15g33780 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma15g33780 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.15g205500	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma15g33780

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma15g33780

Limit To All Plant Sequences

>Glyma15g33780.2   sequence type=transcript   gene model=Glyma15g33780   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATAGAGAACCCGACAACTACACAGTGGGAACACATTCAACATCGTCAGTCATGTGCGCAAGTGCAACACGGTCCTATGATTATGATTATATTTAATGAACACTCCTATGCTGGTTTGGTGTATTAATTTGAGATCTGGCATCAATAGGAGAAGAGGTTCTAATTTGGGAAGGTGCTAAGAATATGGAGAAAACATCTTGGGCGTGCACCGTTATCACCCAGGTGTGTCTCTGCTTTGCTCTATACATAGCTCTCAACTTGGGTCAACCTCAGACTTCTGATCTTTACTTCATCAGTGTCAAAGGAGGTTTCAGACCCTTTACCCAACAATTGCATCTTCTCAAGCAGGTTTTCTTATTTGTGGATATTGCCAACTATGTTCTTTTAATGTTCAATCTTGATGGTTTGAAAGTACCTTGTTCCCAGCATTAGTTTACTTGATGGAATTTGGAAATGGTTTCTTGAGTGAACTAGTTAGTTGCTTTGACTTATTCTCATTTTGCTCACCCTTTTCTTACTTCTCTCTCTTTGCAATGTTAATGAAGATGGATAAGGTGGCAAAAGCTTACAACGCAAGTTTTGTTGTGAGCAGCAGTGAGCTGGGGGAATATGATTCACTCATGCAGAATGCTACTCAACATTTTCCGTCTCTGAGACTACCCTGGTACACCACATACACTACTACTACATCTTCAAAAACAAAAGGACAAGAAGTGGGGTGCTTTTCAAAGAAGATCACGACATCTAACAGGATAACCTCAGGTGTCATCGGTGTGGATACTGAATTATTGAAAGATTATGTCTTGAGAGGATCATTAAGTGGCAACAAAATCAATCAATTGCATTGGCTAATCAAAACACTGGCAGCAAACAGTAGCAACTGGCGCATTATTGTTGGATACCATAGTAGAGAACCCTATTCAATTTTTCTAAATGGAAATTCTGTCTTTAAAAGAGAACTGGCTAATGGATTCCTTCTTCACCATGTCAGCTCAGATCAAATTGTAACCAACTATATAAATTTTGCTGGTGAAGTTGTTTGCACAGCTGTGCTACAACAGAAGGGTAGAGAGATCATGTAAATATTTCGAGTTAAAGATTCACAGTATTACATGGTGGTATCCGTTGGATTAATTTGTTGTAAATTCCATGAGTAAACAGTGCTCATACATTTTGTTATGAATTACTTGAGTAAACAGTGCTCTTAAGAGATTTTTTAATTCTTCACACACGATGGATTTCAACATTGCTAATAATTATTTTGAATATTGATTATTAATTCGAAGACCTTCATTAGAAGATG

>Glyma15g33780.3   sequence type=transcript   gene model=Glyma15g33780   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATAGAGAACCCGACAACTACACAGTGGGAACACATTCAACATCGTCAGTCATGTGCGCAAGTGCAACACGGTCCTATGATTATGATTATATTTAATGAACACTCCTATGCTGGTTTGGTGTATTAATTTGAGATCTGGCATCAATAGGAGAAGAGGTTCTAATTTGGGAAGGTGCTAAGAATATGGAGAAAACATCTTGGGCGTGCACCGTTATCACCCAGTGTCAAAGGAGGTTTCAGACCCTTTACCCAACAATTGCATCTTCTCAAGCAGGTTTTCTTATTTGTGGATATTGCCAACTATGTTCTTTTAATGTTCAATCTTGATGGTTTGAAAGTACCTTGTTCCCAGCATTAGTTTACTTGATGGAATTTGGAAATGGTTTCTTGAGTGAACTAGTTAGTTGCTTTGACTTATTCTCATTTTGCTCACCCTTTTCTTACTTCTCTCTCTTTGCAATGTTAATGAAGATGGATAAGGTGGCAAAAGCTTACAACGCAAGTTTTGTTGTGAGCAGCAGTGAGCTGGGGGAATATGATTCACTCATGCAGAATGCTACTCAACATTTTCCGTCTCTGAGACTACCCTGGTACACCACATACACTACTACTACATCTTCAAAAACAAAAGGACAAGAAGTGGGGTGCTTTTCAAAGAAGATCACGACATCTAACAGGATAACCTCAGGTGTCATCGGTGTGGATACTGAATTATTGAAAGATTATGTCTTGAGAGGATCATTAAGTGGCAACAAAATCAATCAATTGCATTGGCTAATCAAAACACTGGCAGCAAACAGTAGCAACTGGCGCATTATTGTTGGATACCATAGTAGAGAACCCTATTCAATTTTTCTAAATGGAAATTCTGTCTTTAAAAGAGAACTGGCTAATGGATTCCTTCTTCACCATGTCAGCTCAGATCAAATTGTAACCAACTATATAAATTTTGCTGGTGAAGTTGTTTGCACAGCTGTGCTACAACAGAAGGGTAGAGAGATCATGTAAATATTTCGAGTTAAAGATTCACAGTATTACATGGTGGTATCCGTTGGATTAATTTGTTGTAAATTCCATGAGTAAACAGTGCTCATACATTTTGTTATGAATTACTTGAGTAAACAGTGCTCTTAAGAGATTTTTTAATTCTTCACACACGATGGATTTCAACATTGCTAATAATTATTTTGAATATTGATTATTAATTCGAAGACCTTCATTAGAAGATG

>Glyma15g33780.4   sequence type=transcript   gene model=Glyma15g33780   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATAGAGAACCCGACAACTACACAGTGGGAACACATTCAACATCGTCAGTCATGTGCGCAAGTGCAACACGGTCCTATGATTATGATTATATTTAATGAACACTCCTATGCTGGTTTGGTGTATTAATTTGAGATCTGGCATCAATAGGAGAAGAGGTTCTAATTTGGGAAGGTGCTAAGAATATGGAGAAAACATCTTGGGCGTGCACCGTTATCACCCAGTGTCAAAGGAGGTTTCAGACCCTTTACCCAACAATTGCATCTTCTCAAGCAGATGGATAAGGTGGCAAAAGCTTACAACGCAAGTTTTGTTGTGAGCAGCAGTGAGCTGGGGGAATATGATTCACTCATGCAGAATGCTACTCAACATTTTCCGTCTCTGAGACTACCCTGGTACACCACATACACTACTACTACATCTTCAAAAACAAAAGGACAAGAAGTGGGGTGCTTTTCAAAGAAGATCACGACATCTAACAGGATAACCTCAGGTGTCATCGGTGTGGATACTGAATTATTGAAAGATTATGTCTTGAGAGGATCATTAAGTGGCAACAAAATCAATCAATTGCATTGGCTAATCAAAACACTGGCAGCAAACAGTAGCAACTGGCGCATTATTGTTGGATACCATAGTAGAGAACCCTATTCAATTTTTCTAAATGGAAATTCTGTCTTTAAAAGAGAACTGGCTAATGGATTCCTTCTTCACCATGTCAGCTCAGATCAAATTGTAACCAACTATATAAATTTTGCTGGTGAAGTTGTTTGCACAGCTGTGCTACAACAGAAGGGTAGAGAGATCATGTAAATATTTCGAGTTAAAGATTCACAGTATTACATGGTGGTATCCGTTGGATTAATTTGTTGTAAATTCCATGAGTAAACAGTGCTCATACATTTTGTTATGAATTACTTGAGTAAACAGTGCTCTTAAGAGATTTTTTAATTCTTCACACACGATGGATTTCAACATTGCTAATAATTATTTTGAATATTGATTATTAATTCGAAGACCTTCATTAGAAGATG

>Glyma15g33780.5   sequence type=transcript   gene model=Glyma15g33780   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATAGAGAACCCGACAACTACACAGTGGGAACACATTCAACATCGTCAGTCATGTGCGCAAGTGCAACACGGTCCTATGATTATGATTATATTTAATGAACACTCCTATGCTGGTTTGGTGTATTAATTTGAGATCTGGCATCAATAGGAGAAGAGGTTCTAATTTGGGAAGGTGCTAAGAATATGGAGAAAACATCTTGGGCGTGCACCGTTATCACCCAGGTGTGTCTCTGCTTTGCTCTATACATAGCTCTCAACTTGGGTCAACCTCAGACTTCTGATCTTTACTTCATCAGTGTCAAAGGAGGTTTCAGACCCTTTACCCAACAATTGCATCTTCTCAAGCAGGTTTTCTTATTTGTGGATATTGCCAACTATGTTCTTTTAATGTTCAATCTTGATGGTTTGAAAGTACCTTGTTCCCAGCATTAGTTTACTTGATGGAATTTGGAAATGGTTTCTTGAGTGAACTAGTTAGTTGCTTTGACTTATTCTCATTTTGCTCACCCTTTTCTTACTTCTCTCTCTTTGCAATGTTAATGAAGATGGATAAGGTGGCAAAAGCTTACAACGCAAGTTTTGTTGTGAGCAGCAGTGAGCTGGGGGAATATGATTCACTCATGCAGAATGCTACTCAACATTTTCCGTCTCTGAGACTACCCTGGTACACCACATACACTACTACTACATCTTCAAAAACAAAAGGACAAGAAGTGGGGTGCTTTTCAAAGAAGATCACGACATCTAACAGGATAACCTCAGGTGTCATCGGTGTGGATACTGAATTATTGAAAGATTATGTCTTGAGAGGATCATTAAGTGGCAACAAAATCAATCAATTGCATTGGCTAATCAAAACACTGGCAGCAAACAGTAGCAACTGGTATCATCAGTATTGGCATTAAACTTTTCTTTTTGAATCTGACTTTTTTTAAAATATAACTGGATTATGTTAAAAAGTATAACAATTTCTCAACAACCTGTGATATTCAAAATCATTTGTGGTCAACTCTATCTCTTTTACAACCTTCAGGCGCATTATTGTTGGATACCATAGTAGAGAACCCTATTCAATTTTTCTAAATGGAAATTCTGTCTTTAAAAGGTAATGTATTATTCACTATCAGTCCCAGTTTCTGTGCTTTACGTAACTTCTGTTACCAAGCTTATGAAATCTTCTTTAATGTTTCATCCTTCTAGAGAACTGGCTAATGGATTCCTTCTTCACCATGTCAGCTCAGATCAAATTGTAACCAACTATATAAATTTTGCTGGTGAAGTTGTTTGCACAGCTGTGCTACAACAGAAGGGTAGAGAGATCATGTAAATATTTCGAGTTAAAGATTCACAGTATTACATGGTGGTATCCGTTGGATTAATTTGTTGTAAATTCCATGAGTAAACAGTGCTCATACATTTTGTTATGAATTACTTGAGTAAACAGTGCTCTTAAGAGATTTTTTAATTCTTCACACACGATGGATTTCAACATTGCTAATAATTATTTTGAATATTGATTATTAATTCGAAGACCTTCATTAGAAGATG

Coding sequences of Glyma15g33780

Limit To All Plant Sequences

>Glyma15g33780.1   sequence type=CDS   gene model=Glyma15g33780   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAGAAAACATCTTGGGCGTGCACCGTTATCACCCAGGTGTGTCTCTGCTTTGCTCTATACATAGCTCTCAACTTGGGTCAACCTCAGACTTCTGATCTTTACTTCATCAGTGTCAAAGGAGGTTTCAGACCCTTTACCCAACAATTGCATCTTCTCAAGCAGATGGATAAGGTGGCAAAAGCTTACAACGCAAGTTTTGTTGTGAGCAGCAGTGAGCTGGGGGAATATGATTCACTCATGCAGAATGCTACTCAACATTTTCCGTCTCTGAGACTACCCTGGTACACCACATACACTACTACTACATCTTCAAAAACAAAAGGACAAGAAGTGGGGTGCTTTTCAAAGAAGATCACGACATCTAACAGGATAACCTCAGGTGTCATCGGTGTGGATACTGAATTATTGAAAGATTATGTCTTGAGAGGATCATTAAGTGGCAACAAAATCAATCAATTGCATTGGCTAATCAAAACACTGGCAGCAAACAGTAGCAACTGGCGCATTATTGTTGGATACCATAGTAGAGAACCCTATTCAATTTTTCTAAATGGAAATTCTGTCTTTAAAAGAGAACTGGCTAATGGATTCCTTCTTCACCATGTCAGCTCAGATCAAATTGTAACCAACTATATAAATTTTGCTGGTGAAGTTGTTTGCACAGCTGTGCTACAACAGAAGGGTAGAGAGATCATGTAA

>Glyma15g33780.2   sequence type=CDS   gene model=Glyma15g33780   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAATTTGGAAATGGTTTCTTGAGTGAACTAGTTAGTTGCTTTGACTTATTCTCATTTTGCTCACCCTTTTCTTACTTCTCTCTCTTTGCAATGTTAATGAAGATGGATAAGGTGGCAAAAGCTTACAACGCAAGTTTTGTTGTGAGCAGCAGTGAGCTGGGGGAATATGATTCACTCATGCAGAATGCTACTCAACATTTTCCGTCTCTGAGACTACCCTGGTACACCACATACACTACTACTACATCTTCAAAAACAAAAGGACAAGAAGTGGGGTGCTTTTCAAAGAAGATCACGACATCTAACAGGATAACCTCAGGTGTCATCGGTGTGGATACTGAATTATTGAAAGATTATGTCTTGAGAGGATCATTAAGTGGCAACAAAATCAATCAATTGCATTGGCTAATCAAAACACTGGCAGCAAACAGTAGCAACTGGCGCATTATTGTTGGATACCATAGTAGAGAACCCTATTCAATTTTTCTAAATGGAAATTCTGTCTTTAAAAGAGAACTGGCTAATGGATTCCTTCTTCACCATGTCAGCTCAGATCAAATTGTAACCAACTATATAAATTTTGCTGGTGAAGTTGTTTGCACAGCTGTGCTACAACAGAAGGGTAGAGAGATCATGTAA

>Glyma15g33780.3   sequence type=CDS   gene model=Glyma15g33780   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAATTTGGAAATGGTTTCTTGAGTGAACTAGTTAGTTGCTTTGACTTATTCTCATTTTGCTCACCCTTTTCTTACTTCTCTCTCTTTGCAATGTTAATGAAGATGGATAAGGTGGCAAAAGCTTACAACGCAAGTTTTGTTGTGAGCAGCAGTGAGCTGGGGGAATATGATTCACTCATGCAGAATGCTACTCAACATTTTCCGTCTCTGAGACTACCCTGGTACACCACATACACTACTACTACATCTTCAAAAACAAAAGGACAAGAAGTGGGGTGCTTTTCAAAGAAGATCACGACATCTAACAGGATAACCTCAGGTGTCATCGGTGTGGATACTGAATTATTGAAAGATTATGTCTTGAGAGGATCATTAAGTGGCAACAAAATCAATCAATTGCATTGGCTAATCAAAACACTGGCAGCAAACAGTAGCAACTGGCGCATTATTGTTGGATACCATAGTAGAGAACCCTATTCAATTTTTCTAAATGGAAATTCTGTCTTTAAAAGAGAACTGGCTAATGGATTCCTTCTTCACCATGTCAGCTCAGATCAAATTGTAACCAACTATATAAATTTTGCTGGTGAAGTTGTTTGCACAGCTGTGCTACAACAGAAGGGTAGAGAGATCATGTAA

>Glyma15g33780.4   sequence type=CDS   gene model=Glyma15g33780   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGATAAGGTGGCAAAAGCTTACAACGCAAGTTTTGTTGTGAGCAGCAGTGAGCTGGGGGAATATGATTCACTCATGCAGAATGCTACTCAACATTTTCCGTCTCTGAGACTACCCTGGTACACCACATACACTACTACTACATCTTCAAAAACAAAAGGACAAGAAGTGGGGTGCTTTTCAAAGAAGATCACGACATCTAACAGGATAACCTCAGGTGTCATCGGTGTGGATACTGAATTATTGAAAGATTATGTCTTGAGAGGATCATTAAGTGGCAACAAAATCAATCAATTGCATTGGCTAATCAAAACACTGGCAGCAAACAGTAGCAACTGGCGCATTATTGTTGGATACCATAGTAGAGAACCCTATTCAATTTTTCTAAATGGAAATTCTGTCTTTAAAAGAGAACTGGCTAATGGATTCCTTCTTCACCATGTCAGCTCAGATCAAATTGTAACCAACTATATAAATTTTGCTGGTGAAGTTGTTTGCACAGCTGTGCTACAACAGAAGGGTAGAGAGATCATGTAA

>Glyma15g33780.5   sequence type=CDS   gene model=Glyma15g33780   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAATTTGGAAATGGTTTCTTGAGTGAACTAGTTAGTTGCTTTGACTTATTCTCATTTTGCTCACCCTTTTCTTACTTCTCTCTCTTTGCAATGTTAATGAAGATGGATAAGGTGGCAAAAGCTTACAACGCAAGTTTTGTTGTGAGCAGCAGTGAGCTGGGGGAATATGATTCACTCATGCAGAATGCTACTCAACATTTTCCGTCTCTGAGACTACCCTGGTACACCACATACACTACTACTACATCTTCAAAAACAAAAGGACAAGAAGTGGGGTGCTTTTCAAAGAAGATCACGACATCTAACAGGATAACCTCAGGTGTCATCGGTGTGGATACTGAATTATTGAAAGATTATGTCTTGAGAGGATCATTAAGTGGCAACAAAATCAATCAATTGCATTGGCTAATCAAAACACTGGCAGCAAACAGTAGCAACTGGTATCATCAGTATTGGCATTAA

Predicted protein sequences of Glyma15g33780

Limit To All Plant Sequences

>Glyma15g33780.1   sequence type=predicted peptide   gene model=Glyma15g33780   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MEKTSWACTVITQVCLCFALYIALNLGQPQTSDLYFISVKGGFRPFTQQLHLLKQMDKVAKAYNASFVVSSSELGEYDSLMQNATQHFPSLRLPWYTTYTTTTSSKTKGQEVGCFSKKITTSNRITSGVIGVDTELLKDYVLRGSLSGNKINQLHWLIKTLAANSSNWRIIVGYHSREPYSIFLNGNSVFKRELANGFLLHHVSSDQIVTNYINFAGEVVCTAVLQQKGREIM*

>Glyma15g33780.2   sequence type=predicted peptide   gene model=Glyma15g33780   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MEFGNGFLSELVSCFDLFSFCSPFSYFSLFAMLMKMDKVAKAYNASFVVSSSELGEYDSLMQNATQHFPSLRLPWYTTYTTTTSSKTKGQEVGCFSKKITTSNRITSGVIGVDTELLKDYVLRGSLSGNKINQLHWLIKTLAANSSNWRIIVGYHSREPYSIFLNGNSVFKRELANGFLLHHVSSDQIVTNYINFAGEVVCTAVLQQKGREIM*

>Glyma15g33780.3   sequence type=predicted peptide   gene model=Glyma15g33780   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MEFGNGFLSELVSCFDLFSFCSPFSYFSLFAMLMKMDKVAKAYNASFVVSSSELGEYDSLMQNATQHFPSLRLPWYTTYTTTTSSKTKGQEVGCFSKKITTSNRITSGVIGVDTELLKDYVLRGSLSGNKINQLHWLIKTLAANSSNWRIIVGYHSREPYSIFLNGNSVFKRELANGFLLHHVSSDQIVTNYINFAGEVVCTAVLQQKGREIM*

>Glyma15g33780.4   sequence type=predicted peptide   gene model=Glyma15g33780   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MDKVAKAYNASFVVSSSELGEYDSLMQNATQHFPSLRLPWYTTYTTTTSSKTKGQEVGCFSKKITTSNRITSGVIGVDTELLKDYVLRGSLSGNKINQLHWLIKTLAANSSNWRIIVGYHSREPYSIFLNGNSVFKRELANGFLLHHVSSDQIVTNYINFAGEVVCTAVLQQKGREIM*

>Glyma15g33780.5   sequence type=predicted peptide   gene model=Glyma15g33780   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MEFGNGFLSELVSCFDLFSFCSPFSYFSLFAMLMKMDKVAKAYNASFVVSSSELGEYDSLMQNATQHFPSLRLPWYTTYTTTTSSKTKGQEVGCFSKKITTSNRITSGVIGVDTELLKDYVLRGSLSGNKINQLHWLIKTLAANSSNWYHQYWH*

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