|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT4G33760 | AT | Annotation by Michelle Graham. TAIR10: tRNA synthetase class II (D, K and N) family protein | chr4:16189285-16193260 REVERSE LENGTH=664 | SoyBase | E_val: 2.00E-35 | ISS |
GO:0006364 | GO-bp | Annotation by Michelle Graham. GO Biological Process: rRNA processing | SoyBase | N/A | ISS |
GO:0006399 | GO-bp | Annotation by Michelle Graham. GO Biological Process: tRNA metabolic process | SoyBase | N/A | ISS |
GO:0006418 | GO-bp | Annotation by Michelle Graham. GO Biological Process: tRNA aminoacylation for protein translation | SoyBase | N/A | ISS |
GO:0009658 | GO-bp | Annotation by Michelle Graham. GO Biological Process: chloroplast organization | SoyBase | N/A | ISS |
GO:0048481 | GO-bp | Annotation by Michelle Graham. GO Biological Process: ovule development | SoyBase | N/A | ISS |
GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
GO:0005739 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion | SoyBase | N/A | ISS |
GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
GO:0016020 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: membrane | SoyBase | N/A | ISS |
GO:0000166 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: nucleotide binding | SoyBase | N/A | ISS |
GO:0003676 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: nucleic acid binding | SoyBase | N/A | ISS |
GO:0004812 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: aminoacyl-tRNA ligase activity | SoyBase | N/A | ISS |
GO:0005524 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ATP binding | SoyBase | N/A | ISS |
GO:0016874 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ligase activity | SoyBase | N/A | ISS |
PTHR22594 | Panther | ASPARTYL/LYSYL-TRNA SYNTHETASE | JGI | ISS | |
PTHR22594:SF5 | Panther | ASPARTYL-TRNA SYNTHETASE | JGI | ISS | |
PF00152 | PFAM | tRNA synthetases class II (D, K and N) | JGI | ISS | |
UniRef100_G7LAG9 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Aspartyl-tRNA synthetase n=1 Tax=Medicago truncatula RepID=G7LAG9_MEDTR | SoyBase | E_val: 3.00E-35 | ISS |
UniRef100_G7LAG9 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Aspartyl-tRNA synthetase n=1 Tax=Medicago truncatula RepID=G7LAG9_MEDTR | SoyBase | E_val: 3.00E-35 | ISS |
Glyma15g27147 not represented in the dataset |
Glyma15g27147 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma15g27147.1 sequence type=CDS gene model=Glyma15g27147 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGTTTTGTGGAGATGGATTGAAACTCCTATACTGTCAAGATCCACACCAGAAGGTAACCGGGATTATTTAGTTCCATCAAGAATCCAGCTATTTAAGCAAATGCTAAAGGTAGCTGGTTTTGATAAATATTATCAAATTGCAAGATGTTTCCGTGATGAAGATTTAAGAGTTGATAGACAACCTGAGTTCACCCAACTAGATATGGAAATGGCCTTTACTCCTTAA
>Glyma15g27147.1 sequence type=predicted peptide gene model=Glyma15g27147 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MVLWRWIETPILSRSTPEGNRDYLVPSRIQLFKQMLKVAGFDKYYQIARCFRDEDLRVDRQPEFTQLDMEMAFTP*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||