|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT3G55520 | AT | Annotation by Michelle Graham. TAIR10: FKBP-like peptidyl-prolyl cis-trans isomerase family protein | chr3:20594177-20595128 FORWARD LENGTH=190 | SoyBase | E_val: 6.00E-44 | ISS |
GO:0000413 | GO-bp | Annotation by Michelle Graham. GO Biological Process: protein peptidyl-prolyl isomerization | SoyBase | N/A | ISS |
GO:0006457 | GO-bp | Annotation by Michelle Graham. GO Biological Process: protein folding | SoyBase | N/A | ISS |
GO:0018208 | GO-bp | Annotation by Michelle Graham. GO Biological Process: peptidyl-proline modification | SoyBase | N/A | ISS |
GO:0009543 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast thylakoid lumen | SoyBase | N/A | ISS |
GO:0016020 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: membrane | SoyBase | N/A | ISS |
GO:0003755 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: peptidyl-prolyl cis-trans isomerase activity | SoyBase | N/A | ISS |
GO:0005528 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: FK506 binding | SoyBase | N/A | ISS |
PTHR10516 | Panther | FK506 BINDING PROTEIN | JGI | ISS | |
PTHR10516:SF72 | Panther | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED | JGI | ISS | |
PF00254 | PFAM | FKBP-type peptidyl-prolyl cis-trans isomerase | JGI | ISS | |
UniRef100_C6SZE3 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Glycine max RepID=C6SZE3_SOYBN | SoyBase | E_val: 3.00E-43 | ISS |
UniRef100_C6SZE3 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Glycine max RepID=C6SZE3_SOYBN | SoyBase | E_val: 3.00E-43 | ISS |
Glyma15g22801 not represented in the dataset |
Glyma15g22801 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma15g22801.1 sequence type=CDS gene model=Glyma15g22801 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATAGTAACAAAGGCTTGGGAAATTGCAGTGAAAATCGTGAAGGTTGGAGAAGTTGCAAAAATAACTTGCAAGCCAGAATATGCATATGGTAGTGCAGGATCTCCTCCAGATATTTTTCCGGATGCAACACTTGTTTTTGAAGTTGAGCTAGTTGCCTGTCAGCCAAGGAAGGGCTCCAGTTTGGGAAGTGTTTCAAAGGAGAGGGCTAGGCTTGATGAACTGAAGAAGCAGAGAGAGCTAGCTGCTACTGCCAAAGAGGAGAAGAAAAAGTAG
>Glyma15g22801.1 sequence type=predicted peptide gene model=Glyma15g22801 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high IVTKAWEIAVKIVKVGEVAKITCKPEYAYGSAGSPPDIFPDATLVFEVELVACQPRKGSSLGSVSKERARLDELKKQRELAATAKEEKKK*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||