|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT2G19940 | AT | Annotation by Michelle Graham. TAIR10: oxidoreductases, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;copper ion binding | chr2:8613168-8615649 FORWARD LENGTH=401 | SoyBase | E_val: 4.00E-67 | ISS |
GO:0006520 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cellular amino acid metabolic process | SoyBase | N/A | ISS |
GO:0006526 | GO-bp | Annotation by Michelle Graham. GO Biological Process: arginine biosynthetic process | SoyBase | N/A | ISS |
GO:0008652 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cellular amino acid biosynthetic process | SoyBase | N/A | ISS |
GO:0046686 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to cadmium ion | SoyBase | N/A | ISS |
GO:0048481 | GO-bp | Annotation by Michelle Graham. GO Biological Process: ovule development | SoyBase | N/A | ISS |
GO:0055114 | GO-bp | Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process | SoyBase | N/A | ISS |
GO:0005730 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleolus | SoyBase | N/A | ISS |
GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
GO:0009570 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast stroma | SoyBase | N/A | ISS |
GO:0016020 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: membrane | SoyBase | N/A | ISS |
GO:0000166 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: nucleotide binding | SoyBase | N/A | ISS |
GO:0003942 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: N-acetyl-gamma-glutamyl-phosphate reductase activity | SoyBase | N/A | ISS |
GO:0005507 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: copper ion binding | SoyBase | N/A | ISS |
GO:0016620 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | SoyBase | N/A | ISS |
GO:0046983 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: protein dimerization activity | SoyBase | N/A | ISS |
GO:0051287 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: NAD binding | SoyBase | N/A | ISS |
PTHR14097 | Panther | TIP30 SER/THR KINASE-RELATED | JGI | ISS | |
PTHR14097:SF7 | Panther | SUBFAMILY NOT NAMED | JGI | ISS | |
UniRef100_I1ND31 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Glycine max RepID=I1ND31_SOYBN | SoyBase | E_val: 1.00E-86 | ISS |
UniRef100_I1ND31 | UniRef | Annotation by Michelle Graham. Best UniRef hit: N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Glycine max RepID=I1ND31_SOYBN | SoyBase | E_val: 1.00E-86 | ISS |
Glyma15g21180 not represented in the dataset |
Glyma15g21180 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma15g21180.1 sequence type=CDS gene model=Glyma15g21180 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high AAAAAAGCTATATACGGATTGACAGAGGTTTTAACAGAGGAAATAAAGAATGCACGTCTAGTTGCTAATCCTGGTTGTTATCCAACTTCTGTTCAACTTCCTCTTGTCCCATTCATAAAGGCTAGTCTTATTGAGCTTAAAAATATTATCATTGATGCTAAATCTGGTGTGAGTGGAGCAGGACGTAGTGCCAAAGAAAATTTATTGTTCACTGAAGTAACTGAAGGTCTCAATTCTTATGTCAATTTATGGTTTATCTTGATTCATGGTTTATTGCTTTATCATGCCTGTTTCATAGGGCTGTGGAATGATGAAGAATTTGTTGTTATGTTGGAAAATGGAGCCATTCCTCAAACTCATAGTGTTAAAAGGACTAATTACGGTTTAATCAATGTTTTTCTAGATCAAATTCCTGGAAGAGCAATCATTATATCTGTTATTGATAATTTAGTGAAGGGAGCTTCAGGTCAAGCTTTACAAAACCTTAATTTGTTAATGGGATTTCCAAAAAATTTGGGACTTCATTACCTGCCTCTTTTTCCT
>Glyma15g21180.1 sequence type=predicted peptide gene model=Glyma15g21180 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high KKAIYGLTEVLTEEIKNARLVANPGCYPTSVQLPLVPFIKASLIELKNIIIDAKSGVSGAGRSAKENLLFTEVTEGLNSYVNLWFILIHGLLLYHACFIGLWNDEEFVVMLENGAIPQTHSVKRTNYGLINVFLDQIPGRAIIISVIDNLVKGASGQALQNLNLLMGFPKNLGLHYLPLFP
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||