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Report for Sequence Feature Glyma15g21061

Feature Type:gene_model
Chromosome:Gm15
Start:19261094
stop:19263114
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma15g21061
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G16570AT Annotation by Michelle Graham. TAIR10: glutamine synthetase 1;4 | chr5:5421898-5424523 REVERSE LENGTH=356 SoyBaseE_val: 3.00E-49ISS
GO:0006542GO-bp Annotation by Michelle Graham. GO Biological Process: glutamine biosynthetic process SoyBaseN/AISS
GO:0006807GO-bp Annotation by Michelle Graham. GO Biological Process: nitrogen compound metabolic process SoyBaseN/AISS
GO:0009744GO-bp Annotation by Michelle Graham. GO Biological Process: response to sucrose stimulus SoyBaseN/AISS
GO:0009749GO-bp Annotation by Michelle Graham. GO Biological Process: response to glucose stimulus SoyBaseN/AISS
GO:0009750GO-bp Annotation by Michelle Graham. GO Biological Process: response to fructose stimulus SoyBaseN/AISS
GO:0042128GO-bp Annotation by Michelle Graham. GO Biological Process: nitrate assimilation SoyBaseN/AISS
GO:0005737GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm SoyBaseN/AISS
GO:0005829GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytosol SoyBaseN/AISS
GO:0003824GO-mf Annotation by Michelle Graham. GO Molecular Function: catalytic activity SoyBaseN/AISS
GO:0004356GO-mf Annotation by Michelle Graham. GO Molecular Function: glutamate-ammonia ligase activity SoyBaseN/AISS
PTHR20852Panther GLUTAMINE SYNTHETASE JGI ISS
PTHR20852:SF14Panther GLUTAMINE SYNTHETASE (GLUTAMATE--AMMONIA LIGASE) ( JGI ISS
PF00120PFAM Glutamine synthetase, catalytic domain JGI ISS
UniRef100_O82560UniRef Annotation by Michelle Graham. Best UniRef hit: Glutamine synthetase cytosolic isozyme 2 n=2 Tax=Glycine max RepID=GLNA2_SOYBN SoyBaseE_val: 2.00E-52ISS
UniRef100_O82560UniRef Annotation by Michelle Graham. Most informative UniRef hit: Glutamine synthetase cytosolic isozyme 2 n=2 Tax=Glycine max RepID=GLNA2_SOYBN SoyBaseE_val: 2.00E-52ISS

Expression Patterns of Glyma15g21061
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma15g21061 not represented in the dataset
Glyma15g21061 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma15g21061 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.15g186600 Wm82.a2.v1IGC As supplied by JGI

References for Glyma15g21061
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma15g21061
>Glyma15g21061.1   sequence type=CDS   gene model=Glyma15g21061   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGATATGAGGAGCAAAGGAAGGGTAGTTTACTTCACCTTTTTGTATGGCCTAGAGCAAGAATACACCTTGTTGCAAAAAGATGTCCAATGGCTTCTAGGATGGCCTCTTGGTGGTTTTCCTGGGCTACAAGCTTTCGGGCGTGATATTGTCGACTCACATTACAAAGCATGTATTTATGCGGGCATTAACATAAGTGGAATCAATGGAGAAATGATGGGTGGTCAGAGGATCACCAAGATTGCAAGAGTGGTGCTTTCCTTTGACCCTAAACCAATTCAGGGTGATTGGAATGATGCTGGTGCTCACACAAATTATTACAGTACCAAGTCCATGAGAAACGATGGTGGCTATGAAGTCATCAGCAATTGCTAA
Predicted protein sequences of Glyma15g21061
>Glyma15g21061.1   sequence type=predicted peptide   gene model=Glyma15g21061   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MDMRSKGRVVYFTFLYGLEQEYTLLQKDVQWLLGWPLGGFPGLQAFGRDIVDSHYKACIYAGINISGINGEMMGGQRITKIARVVLSFDPKPIQGDWNDAGAHTNYYSTKSMRNDGGYEVISNC*






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