|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT2G25800 | AT | Annotation by Michelle Graham. TAIR10: Protein of unknown function (DUF810) | chr2:11006138-11009728 REVERSE LENGTH=987 | SoyBase | E_val: 2.00E-31 | ISS |
GO:0008150 | GO-bp | Annotation by Michelle Graham. GO Biological Process: biological process | SoyBase | N/A | ISS |
GO:0009832 | GO-bp | Annotation by Michelle Graham. GO Biological Process: plant-type cell wall biogenesis | SoyBase | N/A | ISS |
GO:0016049 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cell growth | SoyBase | N/A | ISS |
GO:0030243 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cellulose metabolic process | SoyBase | N/A | ISS |
GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
PF05664 | PFAM | Protein of unknown function (DUF810) | JGI | ISS | |
UniRef100_I1JUV8 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JUV8_SOYBN | SoyBase | E_val: 2.00E-64 | ISS |
UniRef100_Q7XDI4 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Expressed protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XDI4_ORYSJ | SoyBase | E_val: 1.00E-12 | ISS |
Glyma15g17565 not represented in the dataset |
Glyma15g17565 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.15g162900 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma15g17565.2 sequence type=transcript gene model=Glyma15g17565 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high TGTTAATGTGGCTCTCGCTACCTGGCTGTCTCGCTCTCTTCTTTCTCTCTCTCGCAACAATAACTCATCTCTTCAGAGACCTCTCATTGGGCCACTCCAAGAGAGACTCCACGCCGCCGCTGATAATGCCTCCCAAGCTCGCTGCCGTCACCGCCGCCGACGACCTTCCCTCTTCGTTCGGCCAGCTCGCCGCCTCTCTCTCCGATTCTGACTTTGCACTAACCGCCTACGAGATCTTCCTCGCCGCGTGCCGCACCTCCTCCGGCAAGCCTCTCAGTTTCGCTGCCAACCACTCCTCCACTATCGCCAGCAAGGTCAAGAAGGCCTTTGGCCTTAAATCGCCAGGTTTGGCCTCCAGAAAGAGCCCTGGCTCTGCTTCGGGCCAAGGAAAGCCGAAACGGCCTCTCATCGTCGGCGAGCTGATGCGCAACCAGATGAAGGTTTCCGAAGCCATGGATTCGCACGTGCGACGCGTGCTGCTCAGGATTTCCGCTGGCCAGGGAATACCATCTGTTAGTAAAACACTGGAGGATTCTGATTAATGGGTTACTGCACTCTGTAAGAATCTGACTACTTGGTGGCCATGGGCCCTCGTTCAGGATAAAAATCTTACAATTTGTCATGGAGGGCGAGCCCTAGTGCAGCGGTAAAGTTGTGCCTTGGTGACTTGTTGGTCATGGGTTCGAATCCGGAAACAGCCTCTTTGCATCTGCAAGGCATGTTGGATATTTTTCTATGCAATTGGACGAATTTCTTTCAAAACAGTGCAGAACTCTGAAAGTGTTACTTCATGCTCAAAATAAGTGCCAGGTTTCACAGCCAAGATGAACTTGAGTGATGACGTAGATCTGGAGGATTATGTTTCTCGCCCTGACAAAATCAGTGTGCTGATTTTTGTGCCCAATAATTTTCTTGTCCTATATATCTCATTCTATTTATTTGTACTTTTTTTTTACTAAGAATCCAAAAAAATACTTCTTATTGTTTATATAACATGCTTACATACTCAAAAATACTTTTCTCCTCAATTTTACAATTGTATTTGCG
>Glyma15g17565.1 sequence type=CDS gene model=Glyma15g17565 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTTAATGTGGCTCTCGCTACCTGGCTGTCTCGCTCTCTTCTTTCTCTCTCTCGCAACAATAACTCATCTCTTCAGAGACCTCTCATTGGGCCACTCCAAGAGAGACTCCACGCCGCCGCTGATAATGCCTCCCAAGCTCGCTGCCGTCACCGCCGCCGACGACCTTCCCTCTTCGTTCGGCCAGCTCGCCGCCTCTCTCTCCGATTCTGACTTTGCACTAACCGCCTACGAGATCTTCCTCGCCGCGTGCCGCACCTCCTCCGGCAAGCCTCTCAGTTTCGCTGCCAACCACTCCTCCACTATCGCCAGCAAGGTCAAGAAGGCCTTTGGCCTTAAATCGCCAGGTTTGGCCTCCAGAAAGAGCCCTGGCTCTGCTTCGGGCCAAGGAAAGCCGAAACGGCCTCTCATCGTCGGCGAGCTGATGCGCAACCAGATGAAGGTTTCCGAAGCCATGGATTCGCACGTGCGACGCGTGCTGCTCAGGATTTCCGCTGGCCAGGGAATACCATCTGTTAGTAAAACACTGGAGGATTCTGATTAA >Glyma15g17565.2 sequence type=CDS gene model=Glyma15g17565 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTGGCTCTCGCTACCTGGCTGTCTCGCTCTCTTCTTTCTCTCTCTCGCAACAATAACTCATCTCTTCAGAGACCTCTCATTGGGCCACTCCAAGAGAGACTCCACGCCGCCGCTGATAATGCCTCCCAAGCTCGCTGCCGTCACCGCCGCCGACGACCTTCCCTCTTCGTTCGGCCAGCTCGCCGCCTCTCTCTCCGATTCTGACTTTGCACTAACCGCCTACGAGATCTTCCTCGCCGCGTGCCGCACCTCCTCCGGCAAGCCTCTCAGTTTCGCTGCCAACCACTCCTCCACTATCGCCAGCAAGGTCAAGAAGGCCTTTGGCCTTAAATCGCCAGGTTTGGCCTCCAGAAAGAGCCCTGGCTCTGCTTCGGGCCAAGGAAAGCCGAAACGGCCTCTCATCGTCGGCGAGCTGATGCGCAACCAGATGAAGGTTTCCGAAGCCATGGATTCGCACGTGCGACGCGTGCTGCTCAGGATTTCCGCTGGCCAGGGAATACCATCTGTTAGTAAAACACTGGAGGATTCTGATTAA
>Glyma15g17565.1 sequence type=predicted peptide gene model=Glyma15g17565 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MLMWLSLPGCLALFFLSLATITHLFRDLSLGHSKRDSTPPLIMPPKLAAVTAADDLPSSFGQLAASLSDSDFALTAYEIFLAACRTSSGKPLSFAANHSSTIASKVKKAFGLKSPGLASRKSPGSASGQGKPKRPLIVGELMRNQMKVSEAMDSHVRRVLLRISAGQGIPSVSKTLEDSD* >Glyma15g17565.2 sequence type=predicted peptide gene model=Glyma15g17565 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MWLSLPGCLALFFLSLATITHLFRDLSLGHSKRDSTPPLIMPPKLAAVTAADDLPSSFGQLAASLSDSDFALTAYEIFLAACRTSSGKPLSFAANHSSTIASKVKKAFGLKSPGLASRKSPGSASGQGKPKRPLIVGELMRNQMKVSEAMDSHVRRVLLRISAGQGIPSVSKTLEDSD*
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