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Report for Sequence Feature Glyma15g15650

Feature Type:gene_model
Chromosome:Gm15
Start:12025156
stop:12025680
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma15g15650
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G31175AT Annotation by Michelle Graham. TAIR10: unknown protein; Has 20 Blast hits to 20 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:11140549-11140905 FORWARD LENGTH=118 SoyBaseE_val: 2.00E-30ISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0003674GO-mf Annotation by Michelle Graham. GO Molecular Function: molecular function SoyBaseN/AISS
UniRef100_I1MGK1UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MGK1_SOYBN SoyBaseE_val: 2.00E-56ISS

Expression Patterns of Glyma15g15650
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma15g15650 not represented in the dataset
Glyma15g15650 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma15g15650 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.15g146300 Wm82.a2.v1IGC As supplied by JGI

References for Glyma15g15650
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma15g15650
>Glyma15g15650.1   sequence type=CDS   gene model=Glyma15g15650   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAGAAGAGAAGACACGTGCGAGCGCGTGGAGAAGGCGCTGCGGGAGTGCCACCGGCGAGTTCCGGCGGGTCCGAGTCGCGACTCAGCGTGCCGGCACCTTAACCAGGGGCTGGCGATGTGCCTCGTTTCTCTGGCGTGTCCTGGGGAATCGGAGGCGGTGCGCACCCTCTGCTCCAGCGCCGGCACCGCTCACAAGCGCCACCAGTGCCAGCAGGCGCAGCTTTCTCTCTCTCTATGCCTCTCTTCTCGTCAAAACAATTCCCTGACCTAA
Predicted protein sequences of Glyma15g15650
>Glyma15g15650.1   sequence type=predicted peptide   gene model=Glyma15g15650   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MRREDTCERVEKALRECHRRVPAGPSRDSACRHLNQGLAMCLVSLACPGESEAVRTLCSSAGTAHKRHQCQQAQLSLSLCLSSRQNNSLT*






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