Report for Sequence Feature Glyma15g11570
Feature Type: gene_model
Chromosome: Gm15
Start: 8521887
stop: 8525127
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma15g11570
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G22010 AT
Annotation by Michelle Graham. TAIR10: SKU5 similar 4 | chr4:11663429-11666463 FORWARD LENGTH=541
SoyBase E_val: 0 ISS
GO:0000271 GO-bp
Annotation by Michelle Graham. GO Biological Process: polysaccharide biosynthetic process
SoyBase N/A ISS
GO:0009825 GO-bp
Annotation by Michelle Graham. GO Biological Process: multidimensional cell growth
SoyBase N/A ISS
GO:0009932 GO-bp
Annotation by Michelle Graham. GO Biological Process: cell tip growth
SoyBase N/A ISS
GO:0010075 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of meristem growth
SoyBase N/A ISS
GO:0010817 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of hormone levels
SoyBase N/A ISS
GO:0016126 GO-bp
Annotation by Michelle Graham. GO Biological Process: sterol biosynthetic process
SoyBase N/A ISS
GO:0043481 GO-bp
Annotation by Michelle Graham. GO Biological Process: anthocyanin accumulation in tissues in response to UV light
SoyBase N/A ISS
GO:0048653 GO-bp
Annotation by Michelle Graham. GO Biological Process: anther development
SoyBase N/A ISS
GO:0048767 GO-bp
Annotation by Michelle Graham. GO Biological Process: root hair elongation
SoyBase N/A ISS
GO:0055114 GO-bp
Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process
SoyBase N/A ISS
GO:0071555 GO-bp
Annotation by Michelle Graham. GO Biological Process: cell wall organization
SoyBase N/A ISS
GO:0005576 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: extracellular region
SoyBase N/A ISS
GO:0009505 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plant-type cell wall
SoyBase N/A ISS
GO:0009506 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasmodesma
SoyBase N/A ISS
GO:0016020 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: membrane
SoyBase N/A ISS
GO:0005507 GO-mf
Annotation by Michelle Graham. GO Molecular Function: copper ion binding
SoyBase N/A ISS
GO:0016491 GO-mf
Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity
SoyBase N/A ISS
KOG1263
KOG
Multicopper oxidases
JGI ISS
PTHR11709 Panther
MULTI-COPPER OXIDASE
JGI ISS
PTHR11709:SF11 Panther
MULTICOPPER OXIDASE-RELATED
JGI ISS
PF00394 PFAM
Multicopper oxidase
JGI ISS
PF07731 PFAM
Multicopper oxidase
JGI ISS
PF07732 PFAM
Multicopper oxidase
JGI ISS
UniRef100_G7JJ92 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: L-ascorbate oxidase-like protein n=1 Tax=Medicago truncatula RepID=G7JJ92_MEDTR
SoyBase E_val: 0 ISS
UniRef100_UPI000233BFF1 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233BFF1 related cluster n=1 Tax=unknown RepID=UPI000233BFF1
SoyBase E_val: 0 ISS
Expression Patterns of Glyma15g11570
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma15g11570 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.15g109000 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma15g11570
Coding sequences of Glyma15g11570
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma15g11570.1 sequence type=CDS gene model=Glyma15g11570 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAGACTATGCGAAGCTCTTTCTTCTCTCATTCTTGTTCTTGCACTTGCATTCCTTTACAACGACGTCAACTGTGAAGACCCATATAGATTCTTCACTTGGAAGCTCACCTATGGTGACATTTACCCTCTTGGTGTCAAGCAACAGGGTATCTTGATTAATGGGAAGTTCCCTGGGCCTCTCATAGACCCGGTTACAAATGACAACTTGATCATCAATGTGCATAACTACCTTAGGGAACCATTGCTTATATCATGGAATGGATTACAACAAAGGAGAAACTCATGGCAGGATGGAATTCATGGAACAAATTGTCCAATTCCACCTGGGAAAAACTACACTTATGTTCTCCAAAGCTGTCCTCTGATTCCTGTCCCTTTCCCTCCTGCAGGGGACTTCACCTTACTTGCTGGAGATTGGTTCAAGACACACTACTGTAGGCTGAATAAAATCCTGAATGATGGTCATAATCTTCCCTTCCCTCATGGACTTCTTATCAATGGACGTGGTTGGAATGGAACCACTTTCACTGTTGATAAAGGTAAGACTTACAGATTCGGGATATCAAATGTGGGGCTCACAACATCCATCAACTTCAGAATCCAGGGGCACAAGATGAAACTTGTGAAGCCTGCCAAAAATTACTACATAGATGTCTCCACAAGATTTACCAAACAGATACTCACAACAACTTCCATTCTTCACTACAACAATTCAAGCAATAGGGTATCTGGTCCCATTCCCCAAGATGTCATTGCTTCCTCTCTTTTTCAGGCCAGGACTATTCGATGGAACCTGACAGCAAGTAGACCTAGGCCAAACCCTCAGGGATCTTACCAGTATGGATTGATAAAACCCATTAGAACCATCATTTTGGAAAACTCTGCCCCTATTATCAATGGCAAGCAGAGGTATGCGATCAACGGCGTCTCATATGTTGCACCAGATATTCCGTTGAAACTAGCTGATTACTTCAACATCTCTGGAGTTTTCTCTGTTGGAAGAATTCCTACCAACACTAACAAAGGCAAATCCCTCCTCCAAACTTCTGTCATGGGGGCTAACTTCCATGAATTTGTGGAGATTGTGTTCCAAAACTGGGAGAACTTTTTGCAGTCATGGCATATTGATGGCTATTCTTTCTTTGGTGTGGGGTTTAGTAGCGGGCAGTGGACACCTACAAGTAGAGCATACTACAATCTAAGAGACGCTATTCCTAGATGCACCACTCAGGTGTACCCAAAGTCATGGGCTGCAATTTATATAGCGCTAGACAATGTGGGAATGTGGAATGTAAGGTCTGAGAATTGGGCAAGGCAATACTTGGGACAACAATTCTATCATAGAGTGTATACATCTTCCAAGTCATATGGAGAGATGAATATCCGATCCCAAAGAATGCACTTCTTTGTGGCAGGGCCAGAGGTCGCAACACTCTAG
Predicted protein sequences of Glyma15g11570
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma15g11570.1 sequence type=predicted peptide gene model=Glyma15g11570 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MRLCEALSSLILVLALAFLYNDVNCEDPYRFFTWKLTYGDIYPLGVKQQGILINGKFPGPLIDPVTNDNLIINVHNYLREPLLISWNGLQQRRNSWQDGIHGTNCPIPPGKNYTYVLQSCPLIPVPFPPAGDFTLLAGDWFKTHYCRLNKILNDGHNLPFPHGLLINGRGWNGTTFTVDKGKTYRFGISNVGLTTSINFRIQGHKMKLVKPAKNYYIDVSTRFTKQILTTTSILHYNNSSNRVSGPIPQDVIASSLFQARTIRWNLTASRPRPNPQGSYQYGLIKPIRTIILENSAPIINGKQRYAINGVSYVAPDIPLKLADYFNISGVFSVGRIPTNTNKGKSLLQTSVMGANFHEFVEIVFQNWENFLQSWHIDGYSFFGVGFSSGQWTPTSRAYYNLRDAIPRCTTQVYPKSWAAIYIALDNVGMWNVRSENWARQYLGQQFYHRVYTSSKSYGEMNIRSQRMHFFVAGPEVATL*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
