Report for Sequence Feature Glyma15g11255
Feature Type: gene_model
Chromosome: Gm15
Start: 8247413
stop: 8248301
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma15g11255
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
UniRef100_A0ZXY5 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Peroxiredoxin II F (Fragment) n=1 Tax=Pisum sativum RepID=A0ZXY5_PEA
SoyBase E_val: 2.00E-06 ISS
UniRef100_UPI000233BE99 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233BE99 related cluster n=1 Tax=unknown RepID=UPI000233BE99
SoyBase E_val: 2.00E-27 ISS
Expression Patterns of Glyma15g11255
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma15g11255
Paralog Evidence Comments
Glyma13g27701 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma15g11255 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
References for Glyma15g11255
Coding sequences of Glyma15g11255
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma15g11255.1 sequence type=CDS gene model=Glyma15g11255 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGACACCCGGTTTGGTGAAGCGACTCACCAAGTCATTGTCTGCAACTCTTGGGTTCAGATCTTCTTCCTCTGTCGCCAAGGTTACAACTGGAACTGACCTTCTCTCGATTGCACATAATGTTTCTCTTCAGAAAGCTCTCACGTGGGACGAAGGCGTTGCTTCTATGCCATTCTCATTTTCAAACCATTTTTATCCTTTTGGCTCAGTTACTATAACTAATGTCCTCTCCCCACGATGTTTCAGTACAAGAAAGTGGTCATATTTGGAATCCCGGATGCATTCACAGGGGTTTGTTCAGAAGAACATGTTCCAACTTACATGGATAATATTGATAAGTTTAAGGCTAAGGGAATCCATGCCGTTATTCGTGTCTCGATTAATGATCCATTTACTATGA
Predicted protein sequences of Glyma15g11255
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma15g11255.1 sequence type=predicted peptide gene model=Glyma15g11255 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MTPGLVKRLTKSLSATLGFRSSSSVAKVTTGTDLLSIAHNVSLQKALTWDEGVASMPFSFSNHFYPFGSVTITNVLSPRCFSTRKWSYLESRMHSQGFVQKNMFQLTWIILISLRLRESMPLFVSRLMIHLL*