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Report for Sequence Feature Glyma15g11020

Feature Type:gene_model
Chromosome:Gm15
Start:8046530
stop:8047147
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G55950AT Annotation by Michelle Graham. TAIR10: CRINKLY4 related 3 | chr3:20753903-20756347 REVERSE LENGTH=814 SoyBaseE_val: 6.00E-20ISS
GO:0006468GO-bp Annotation by Michelle Graham. GO Biological Process: protein phosphorylation SoyBaseN/AISS
GO:0006612GO-bp Annotation by Michelle Graham. GO Biological Process: protein targeting to membrane SoyBaseN/AISS
GO:0009723GO-bp Annotation by Michelle Graham. GO Biological Process: response to ethylene stimulus SoyBaseN/AISS
GO:0009738GO-bp Annotation by Michelle Graham. GO Biological Process: abscisic acid mediated signaling pathway SoyBaseN/AISS
GO:0010363GO-bp Annotation by Michelle Graham. GO Biological Process: regulation of plant-type hypersensitive response SoyBaseN/AISS
GO:0035556GO-bp Annotation by Michelle Graham. GO Biological Process: intracellular signal transduction SoyBaseN/AISS
GO:0043069GO-bp Annotation by Michelle Graham. GO Biological Process: negative regulation of programmed cell death SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0004672GO-mf Annotation by Michelle Graham. GO Molecular Function: protein kinase activity SoyBaseN/AISS
GO:0004674GO-mf Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity SoyBaseN/AISS
GO:0005524GO-mf Annotation by Michelle Graham. GO Molecular Function: ATP binding SoyBaseN/AISS
GO:0016301GO-mf Annotation by Michelle Graham. GO Molecular Function: kinase activity SoyBaseN/AISS
GO:0016772GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups SoyBaseN/AISS
GO:0042803GO-mf Annotation by Michelle Graham. GO Molecular Function: protein homodimerization activity SoyBaseN/AISS
UniRef100_G7JBB1UniRef Annotation by Michelle Graham. Most informative UniRef hit: Serine/threonine protein kinase-like protein CCR4 n=1 Tax=Medicago truncatula RepID=G7JBB1_MEDTR SoyBaseE_val: 8.00E-36ISS
UniRef100_UPI000233B6C9UniRef Annotation by Michelle Graham. Best UniRef hit: UPI000233B6C9 related cluster n=1 Tax=unknown RepID=UPI000233B6C9 SoyBaseE_val: 3.00E-62ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma15g11020 not represented in the dataset

Glyma15g11020 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments
Glyma.15g103600 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma15g11020.1   sequence type=CDS   gene model=Glyma15g11020   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCACTGTTCTATTCGAGAATATCGCCCTCAAAGACTCCCAGGTTTGCGCCTCCGTGGTCGGCGTCGTGCTGGAGAACCAACGCCGCGATCGAATCGCCATCTGGGTTGGACAGGTTTGATTCCATTTCATCTGGGTCGGGCTTCTCTTGCGGAGTTTTGAAGGGTAGTGATCGGGTTCGGTGTTGGGGTGTTGGGTCTATAGCCAGAAAAATGGAGAGTGAGTTTAGGAACATGTTTATGGTGAGTCTTGTGGATGGGGAGTCACATGTTTGTGGGTTGAATTCAAGTGGGTATTTGGTTTGCAGAGGAAGTAACGACTTTGGTCAAATTGATGTTCCTAAAGGAGGTGCTTTGGAGTTTTCTGGTTTGGCACTTGGGGTTGAGCACACTTGA

>Glyma15g11020.1   sequence type=predicted peptide   gene model=Glyma15g11020   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MALFYSRISPSKTPRFAPPWSASCWRTNAAIESPSGLDRFDSISSGSGFSCGVLKGSDRVRCWGVGSIARKMESEFRNMFMVSLVDGESHVCGLNSSGYLVCRGSNDFGQIDVPKGGALEFSGLALGVEHT*







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