|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT3G55950 | AT | Annotation by Michelle Graham. TAIR10: CRINKLY4 related 3 | chr3:20753903-20756347 REVERSE LENGTH=814 | SoyBase | E_val: 6.00E-20 | ISS |
GO:0006468 | GO-bp | Annotation by Michelle Graham. GO Biological Process: protein phosphorylation | SoyBase | N/A | ISS |
GO:0006612 | GO-bp | Annotation by Michelle Graham. GO Biological Process: protein targeting to membrane | SoyBase | N/A | ISS |
GO:0009723 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to ethylene stimulus | SoyBase | N/A | ISS |
GO:0009738 | GO-bp | Annotation by Michelle Graham. GO Biological Process: abscisic acid mediated signaling pathway | SoyBase | N/A | ISS |
GO:0010363 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of plant-type hypersensitive response | SoyBase | N/A | ISS |
GO:0035556 | GO-bp | Annotation by Michelle Graham. GO Biological Process: intracellular signal transduction | SoyBase | N/A | ISS |
GO:0043069 | GO-bp | Annotation by Michelle Graham. GO Biological Process: negative regulation of programmed cell death | SoyBase | N/A | ISS |
GO:0005886 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane | SoyBase | N/A | ISS |
GO:0004672 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: protein kinase activity | SoyBase | N/A | ISS |
GO:0004674 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity | SoyBase | N/A | ISS |
GO:0005524 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ATP binding | SoyBase | N/A | ISS |
GO:0016301 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: kinase activity | SoyBase | N/A | ISS |
GO:0016772 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups | SoyBase | N/A | ISS |
GO:0042803 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: protein homodimerization activity | SoyBase | N/A | ISS |
UniRef100_G7JBB1 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Serine/threonine protein kinase-like protein CCR4 n=1 Tax=Medicago truncatula RepID=G7JBB1_MEDTR | SoyBase | E_val: 8.00E-36 | ISS |
UniRef100_UPI000233B6C9 | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI000233B6C9 related cluster n=1 Tax=unknown RepID=UPI000233B6C9 | SoyBase | E_val: 3.00E-62 | ISS |
Glyma15g11020 not represented in the dataset |
Glyma15g11020 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.15g103600 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma15g11020.1 sequence type=CDS gene model=Glyma15g11020 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGCACTGTTCTATTCGAGAATATCGCCCTCAAAGACTCCCAGGTTTGCGCCTCCGTGGTCGGCGTCGTGCTGGAGAACCAACGCCGCGATCGAATCGCCATCTGGGTTGGACAGGTTTGATTCCATTTCATCTGGGTCGGGCTTCTCTTGCGGAGTTTTGAAGGGTAGTGATCGGGTTCGGTGTTGGGGTGTTGGGTCTATAGCCAGAAAAATGGAGAGTGAGTTTAGGAACATGTTTATGGTGAGTCTTGTGGATGGGGAGTCACATGTTTGTGGGTTGAATTCAAGTGGGTATTTGGTTTGCAGAGGAAGTAACGACTTTGGTCAAATTGATGTTCCTAAAGGAGGTGCTTTGGAGTTTTCTGGTTTGGCACTTGGGGTTGAGCACACTTGA
>Glyma15g11020.1 sequence type=predicted peptide gene model=Glyma15g11020 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MALFYSRISPSKTPRFAPPWSASCWRTNAAIESPSGLDRFDSISSGSGFSCGVLKGSDRVRCWGVGSIARKMESEFRNMFMVSLVDGESHVCGLNSSGYLVCRGSNDFGQIDVPKGGALEFSGLALGVEHT*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||