Report for Sequence Feature Glyma15g10700
Feature Type: gene_model
Chromosome: Gm15
Start: 7760988
stop: 7765562
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma15g10700
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G15545 AT
Annotation by Michelle Graham. TAIR10: unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:8875932-8877567 FORWARD LENGTH=337
SoyBase E_val: 3.00E-127 ISS
GO:0006833 GO-bp
Annotation by Michelle Graham. GO Biological Process: water transport
SoyBase N/A ISS
GO:0009637 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to blue light
SoyBase N/A ISS
GO:0009651 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to salt stress
SoyBase N/A ISS
GO:0009750 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to fructose stimulus
SoyBase N/A ISS
GO:0010075 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of meristem growth
SoyBase N/A ISS
GO:0010155 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of proton transport
SoyBase N/A ISS
GO:0042744 GO-bp
Annotation by Michelle Graham. GO Biological Process: hydrogen peroxide catabolic process
SoyBase N/A ISS
GO:0046777 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein autophosphorylation
SoyBase N/A ISS
UniRef100_I1MFA1 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1MFA1_SOYBN
SoyBase E_val: 0 ISS
UniRef100_Q93W28 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: AT4g15540/dl3810w n=1 Tax=Arabidopsis thaliana RepID=Q93W28_ARATH
SoyBase E_val: 1.00E-124 ISS
Expression Patterns of Glyma15g10700
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma15g10700 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.15g100200 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma15g10700
Coding sequences of Glyma15g10700
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma15g10700.1 sequence type=CDS gene model=Glyma15g10700 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGCTGGTGAGTGAATCGAGTGGTTCGAAGGTGGATCTTCCGGAGGAGTTGCTAAATGTTCTACCGTCCGATCCTTACGAGCAGCTCGATGTGGCCCGCAAGATCACCTCCGTTGCGCTGTCGACACGTGTCGACGCGCTCCAATCAGAGTCGTCCGCTCTACGCGCCGAACTCGCCGATAGGAACCGGCTCATCGCCGAGCTCCAGTCTCAGGTGGAGTCCATCGACGCCGCTCTCTCCGAAGCCGCCGATAAGCTAGCCCGAGCCGACCAAGACAAGGAGAATTTGCTGAAGGAGAACGCTTCGCTTTCCAACACAGTGAGAAAGCTCACCAGAGATGTCTCCAAGTTGGAGACTTTCAGAAAGACGCTTATGAAATCACTTCGCGAGGATGAAGATACTTCTGAAGGAACGCCGGACACTGCAGCTAAGTTACACAGTCAAGCAAGTTTCACTTCCACATCGCAATTTGGAGATGATGATGCATCTTCAACGCTTTCTTCTAGAACATCTTCGATGCGAATAAACACTTCTGATATGGGAAATTATTTAGCAGAGGATCGTGAGTCTGATGGCTCAAAATCTCGAGCATCACATAATCTCCTCTTAGCATCTCAAACTAGCACCCCTCGAATTACTCCCCCTGGTTCCCCTCCTAGTATGTCTGCATTGGTATCCCCAACAAGAACATCATCTAAGCCTGTGTCTCCAAGGCGCCATGCAATTTCCTTTTCAACCTCAAGAGGAATGTTTGATGATAGGTCTTCAGTAGGGTCACAAACTGGACGAACACGCGTGGATGGAAAAGAGTTTTTTCGCCAAGTTAGGAGTCGTTTATCTTATGAGCAGTTTGGTGCATTTTTGGCAAATGTTAAGGAACTGAATTCTCATAAACAAACTAAAGAGGAAACACTACAGAAAGCTAATGAGTTATTTGGGCCTGAAAACAAGGACCTCTATACTATATTTGAGGGACTGATAACGCGCAATGTCCATTAG
Predicted protein sequences of Glyma15g10700
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma15g10700.1 sequence type=predicted peptide gene model=Glyma15g10700 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MLVSESSGSKVDLPEELLNVLPSDPYEQLDVARKITSVALSTRVDALQSESSALRAELADRNRLIAELQSQVESIDAALSEAADKLARADQDKENLLKENASLSNTVRKLTRDVSKLETFRKTLMKSLREDEDTSEGTPDTAAKLHSQASFTSTSQFGDDDASSTLSSRTSSMRINTSDMGNYLAEDRESDGSKSRASHNLLLASQTSTPRITPPGSPPSMSALVSPTRTSSKPVSPRRHAISFSTSRGMFDDRSSVGSQTGRTRVDGKEFFRQVRSRLSYEQFGAFLANVKELNSHKQTKEETLQKANELFGPENKDLYTIFEGLITRNVH*