Report for Sequence Feature Glyma15g09605
Feature Type: gene_model
Chromosome: Gm15
Start: 6879887
stop: 6880583
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma15g09605
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G34340 AT
Annotation by Michelle Graham. TAIR10: Protein of unknown function, DUF584 | chr2:14489032-14489442 REVERSE LENGTH=136
SoyBase E_val: 1.00E-22 ISS
GO:0009062 GO-bp
Annotation by Michelle Graham. GO Biological Process: fatty acid catabolic process
SoyBase N/A ISS
GO:0009739 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to gibberellin stimulus
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
PF04520 PFAM
Protein of unknown function, DUF584
JGI ISS
UniRef100_B6U7S5 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Nuclear protein n=1 Tax=Zea mays RepID=B6U7S5_MAIZE
SoyBase E_val: 9.00E-10 ISS
UniRef100_I1MEY9 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1MEY9_SOYBN
SoyBase E_val: 1.00E-72 ISS
Expression Patterns of Glyma15g09605
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma15g09605
Paralog Evidence Comments
Glyma13g29450 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma15g09605 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.15g089600 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma15g09605
Coding sequences of Glyma15g09605
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma15g09605.1 sequence type=CDS gene model=Glyma15g09605 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCTGAGGAGTTCGTCGAATCCGAGGTTGTCTTTCCCGACCACCGCGCCGCCCACGACTGGGTAGTGGAGCTGGCGCCCCCGCCGCGGAGGGAGAGGGAGAATTGTCGACGGAGGGCGGCGAATTCGATGCCGGTGAGTATACCGGAGAGGACGGGCCGGCGGCACTGGGGCTCCGCCGAGGAGGAGGCGGAAGAGGAGGAGATGACGCCGCCGCACGAGATCGTGAAGAGGAGGGTGGCTGCAAAAATGGCGTTTTCGGTGTGCACGGGGAATGGGAGGACATTGAAGGGACGTGATTTGAGTCAGGTCAGGAATTCGATTCTCAGGTTAACTTATAAGAAAGCTCCATGCCCAAAGTTTCATACAAGCGAAGATGGGAAAATGGAAAATTTAAAAAGAAAAAGAAAAATTGTCTCCATTTCTTCATTTTTCTTGCTTTGTTATTTAATTGATTGGTTAATTGGGCTAGCTATTGAGATCGTTTTTGGAGTCTCGTTCATTGTAAAAGGGAACATTTGA
Predicted protein sequences of Glyma15g09605
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma15g09605.1 sequence type=predicted peptide gene model=Glyma15g09605 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MAEEFVESEVVFPDHRAAHDWVVELAPPPRRERENCRRRAANSMPVSIPERTGRRHWGSAEEEAEEEEMTPPHEIVKRRVAAKMAFSVCTGNGRTLKGRDLSQVRNSILRLTYKKAPCPKFHTSEDGKMENLKRKRKIVSISSFFLLCYLIDWLIGLAIEIVFGVSFIVKGNI*