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Report for Sequence Feature Glyma15g09415

Feature Type:gene_model
Chromosome:Gm15
Start:6731054
stop:6731494
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma15g09415
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G60500AT Annotation by Michelle Graham. TAIR10: Dynamin related protein 4C | chr1:22291582-22293822 FORWARD LENGTH=669 SoyBaseE_val: 7.00E-37ISS
GO:0005737GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm SoyBaseN/AISS
GO:0003924GO-mf Annotation by Michelle Graham. GO Molecular Function: GTPase activity SoyBaseN/AISS
GO:0005525GO-mf Annotation by Michelle Graham. GO Molecular Function: GTP binding SoyBaseN/AISS
PTHR11566Panther DYNAMIN JGI ISS
PTHR11566:SF22Panther DYNAMIN-RELATED GTPASE JGI ISS
UniRef100_G7L7C0UniRef Annotation by Michelle Graham. Most informative UniRef hit: Interferon-induced GTP-binding protein Mx n=1 Tax=Medicago truncatula RepID=G7L7C0_MEDTR SoyBaseE_val: 3.00E-48ISS
UniRef100_I1M1N3UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1M1N3_SOYBN SoyBaseE_val: 4.00E-60ISS

Expression Patterns of Glyma15g09415
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma15g09415 not represented in the dataset
Glyma15g09415 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma15g09415 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.15g087800 Wm82.a2.v1IGC As supplied by JGI

References for Glyma15g09415
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma15g09415
>Glyma15g09415.1   sequence type=CDS   gene model=Glyma15g09415   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCCTAACTATACCTTGATTGAGAGACATTTCTACAAAAGCTGTGGTCACAAAACGGGTGAGAAGACTCTTGCTGTGGTCACAAAAGCTGATAAGGCCCCTGAGGGCTTGCATGAGAAGCTAACTGCTAATGATGTCAACATTGGACTTGGCTATGTGTGTGTCAGAAATCGCATTGGGGTTGAGTCCAATGAAGCCAAACTATTCCAGACACACCTACTTTTGTTCAAAATTGACAAGTCCATTGTGGGCATTCCAGTTTTGGCACAGAAGCTGATTCAACTTCAAGCAGCTAGTATTTCCGAAATACTGCTTAAGAAGATCAATAACAAGCTCGGTTCTCAGCTTTCGGAGCTGGACAAATTAACAAAGAACCTTACTTCCGTGGCTGATGCCATGTCTGCATTCATGCATATCATTGGGTTGGCAAAGAGTGACTGA
Predicted protein sequences of Glyma15g09415
>Glyma15g09415.1   sequence type=predicted peptide   gene model=Glyma15g09415   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MPNYTLIERHFYKSCGHKTGEKTLAVVTKADKAPEGLHEKLTANDVNIGLGYVCVRNRIGVESNEAKLFQTHLLLFKIDKSIVGIPVLAQKLIQLQAASISEILLKKINNKLGSQLSELDKLTKNLTSVADAMSAFMHIIGLAKSD*






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