Report for Sequence Feature Glyma15g09370
Feature Type: gene_model
Chromosome: Gm15
Start: 6704292
stop: 6710277
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma15g09370
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G18910 AT
Annotation by Michelle Graham. TAIR10: NOD26-like intrinsic protein 1;2 | chr4:10366211-10368179 FORWARD LENGTH=294
SoyBase E_val: 2.00E-130 ISS
GO:0006810 GO-bp
Annotation by Michelle Graham. GO Biological Process: transport
SoyBase N/A ISS
GO:0006833 GO-bp
Annotation by Michelle Graham. GO Biological Process: water transport
SoyBase N/A ISS
GO:0006857 GO-bp
Annotation by Michelle Graham. GO Biological Process: oligopeptide transport
SoyBase N/A ISS
GO:0015700 GO-bp
Annotation by Michelle Graham. GO Biological Process: arsenite transport
SoyBase N/A ISS
GO:0046685 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to arsenic-containing substance
SoyBase N/A ISS
GO:0055085 GO-bp
Annotation by Michelle Graham. GO Biological Process: transmembrane transport
SoyBase N/A ISS
GO:0080170 GO-bp
Annotation by Michelle Graham. GO Biological Process: hydrogen peroxide transmembrane transport
SoyBase N/A ISS
GO:0005737 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0016020 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: membrane
SoyBase N/A ISS
GO:0016021 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane
SoyBase N/A ISS
GO:0005215 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transporter activity
SoyBase N/A ISS
GO:0015105 GO-mf
Annotation by Michelle Graham. GO Molecular Function: arsenite transmembrane transporter activity
SoyBase N/A ISS
GO:0015250 GO-mf
Annotation by Michelle Graham. GO Molecular Function: water channel activity
SoyBase N/A ISS
KOG0223
KOG
Aquaporin (major intrinsic protein family)
JGI ISS
PTHR19139 Panther
AQUAPORIN TRANSPORTER
JGI ISS
PTHR19139:SF22 Panther
gb def: glycerol uptake facilitator protein [mycoplasma pulmonis]
JGI ISS
PF00230 PFAM
Major intrinsic protein
JGI ISS
UniRef100_G7ILK7 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Aquaporin NIP1-2 n=1 Tax=Medicago truncatula RepID=G7ILK7_MEDTR
SoyBase E_val: 1.00E-170 ISS
UniRef100_UPI0001B379BB UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI0001B379BB related cluster n=1 Tax=unknown RepID=UPI0001B379BB
SoyBase E_val: 0 ISS
Expression Patterns of Glyma15g09370
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma15g09370
Paralog Evidence Comments
Glyma13g29690 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma15g09370 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.15g087300 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma15g09370
Transcripts of Glyma15g09370
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma15g09370.2 sequence type=transcript gene model=Glyma15g09370 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
AAAAGTGGTTGTTTGGTCTAAACGTCCCCTGGAAAAAAATGATAAAAGTCCAATAATCTCTGAATCTCTCTCTCTGTATGCTCCCTGACTCTTTTACAACTTTTTGGTGCCCATAAATTGGAGTTCCTCCCTCGCTTCTCCATCACTTGTGGTCTTTGATACAAAGCTAGCATAGCATTTTTCTTTAACAAAGCAAGACACCCTTTTCCTTTTCATTCCATCATCTCTTTAGCTTTGTCCAAAGACCATGTCTGTGGTGGCCGATAATTCAGCAAACAATGGAAGCCACCAGGTGGTTTTAAATGTAAACGGTGATGCCTCCAAAAAGTGTGATGACTCATCTAACCAAGACTGTGTGCCACTTCTGCAGAAGTTGGTAGCAGAGGTGGTGGGGACGTACTTCTTGATATTTGCAGGGTGTGCTTCAGTGGTGGTGAACCTTGACAAGGACAAAGTGGTCACACAACCTGGGATTTCAATTGTTTGGGGCCTCACTGTTATGGTTTTGGTTTACTCTGTTGGTCACATCTCTGGTGCTCATTTCAACCCTGCTGTCACTATTGCTCATGCTACCACCAAAAGGTTTCCACTGAAGCAGGTACCCGCCTATGTGATAGCTCAGGTCGTTGGAGCCACACTTGCTAGTGGAACTCTCAGACTTATATTCAATGGCAAGAGTGACCACTTTACAGGAACACTCCCTGGCGGTTCTGACTTGCAATCTTTTGTGGTCGAATTCATAATCACTTTTTATCTCATGTTCGTCATTTCTGGCGTTGCCACCGATAACAGAGCGATTGGAGAGTTGGCAGGGCTTGCAGTTGGGTCTACGGTACTGCTGAATGTGATGTTTGCCGGGCCAATCACAGGAGCATCAATGAATCCAGCAAGAAGCTTAGGGCCTGCTATTTTGCACCATGAGTACAGAGGAATATGGATGTATTTGGCGTCACCAATTCTTGGAGCTCTGGCTGGTACATGGGTCTACACTTTCATCAGATACACAAACAAGCCAGTGCGTGAGATCACCCGGAGTGCCTCTTTCCTCAAAGGTCGCGAAGCTGAGTGA
Coding sequences of Glyma15g09370
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma15g09370.1 sequence type=CDS gene model=Glyma15g09370 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGTCTGTGGTGGCCGATAATTCAGCAAACAATGGAAGCCACCAGGTGGTTTTAAATGTAAACGGTGATGCCTCCAAAAAGTGTGATGACTCATCTAACCAAGACTGTGTGCCACTTCTGCAGAAGTTGGTAGCAGAGGTGGTGGGGACGTACTTCTTGATATTTGCAGGGTGTGCTTCAGTGGTGGTGAACCTTGACAAGGACAAAGTGGTCACACAACCTGGGATTTCAATTGTTTGGGGCCTCACTGTTATGGTTTTGGTTTACTCTGTTGGTCACATCTCTGGTGCTCATTTCAACCCTGCTGTCACTATTGCTCATGCTACCACCAAAAGGTTTCCACTGAAGCAGGTACCCGCCTATGTGATAGCTCAGGTCGTTGGAGCCACACTTGCTAGTGGAACTCTCAGACTTATATTCAATGGCAAGAGTGACCACTTTACAGGAACACTCCCTGGCGGTTCTGACTTGCAATCTTTTGTGGTCGAATTCATAATCACTTTTTATCTCATGTTCGTCATTTCTGGCGTTGCCACCGATAACAGAGCGATTGGAGAGTTGGCAGGGCTTGCAGTTGGGTCTACGGTACTGCTGAATGTGATGTTTGCCGGGCCAATCACAGGGGCATCAATGAATCCAGCAAGAAGCTTAGGGCCTGCTATTGTGCACAATGAGTACAAAGGAATATGGATATATTTGGTGTCACCAACTCTTGGAGCTGTGGCTGGTACTTGGGCCTATAATTTCATCAGGTACACAAATAAGCCAGTGCGTGAAATCACCAAGAGTGCCTCTTTCCTCAAAGGTGGTGAAGCTGAGTGA
>Glyma15g09370.2 sequence type=CDS gene model=Glyma15g09370 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGTCTGTGGTGGCCGATAATTCAGCAAACAATGGAAGCCACCAGGTGGTTTTAAATGTAAACGGTGATGCCTCCAAAAAGTGTGATGACTCATCTAACCAAGACTGTGTGCCACTTCTGCAGAAGTTGGTAGCAGAGGTGGTGGGGACGTACTTCTTGATATTTGCAGGGTGTGCTTCAGTGGTGGTGAACCTTGACAAGGACAAAGTGGTCACACAACCTGGGATTTCAATTGTTTGGGGCCTCACTGTTATGGTTTTGGTTTACTCTGTTGGTCACATCTCTGGTGCTCATTTCAACCCTGCTGTCACTATTGCTCATGCTACCACCAAAAGGTTTCCACTGAAGCAGGTACCCGCCTATGTGATAGCTCAGGTCGTTGGAGCCACACTTGCTAGTGGAACTCTCAGACTTATATTCAATGGCAAGAGTGACCACTTTACAGGAACACTCCCTGGCGGTTCTGACTTGCAATCTTTTGTGGTCGAATTCATAATCACTTTTTATCTCATGTTCGTCATTTCTGGCGTTGCCACCGATAACAGAGCGATTGGAGAGTTGGCAGGGCTTGCAGTTGGGTCTACGGTACTGCTGAATGTGATGTTTGCCGGGCCAATCACAGGAGCATCAATGAATCCAGCAAGAAGCTTAGGGCCTGCTATTTTGCACCATGAGTACAGAGGAATATGGATGTATTTGGCGTCACCAATTCTTGGAGCTCTGGCTGGTACATGGGTCTACACTTTCATCAGATACACAAACAAGCCAGTGCGTGAGATCACCCGGAGTGCCTCTTTCCTCAAAGGTCGCGAAGCTGAGTGA
Predicted protein sequences of Glyma15g09370
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma15g09370.1 sequence type=predicted peptide gene model=Glyma15g09370 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MSVVADNSANNGSHQVVLNVNGDASKKCDDSSNQDCVPLLQKLVAEVVGTYFLIFAGCASVVVNLDKDKVVTQPGISIVWGLTVMVLVYSVGHISGAHFNPAVTIAHATTKRFPLKQVPAYVIAQVVGATLASGTLRLIFNGKSDHFTGTLPGGSDLQSFVVEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVHNEYKGIWIYLVSPTLGAVAGTWAYNFIRYTNKPVREITKSASFLKGGEAE*
>Glyma15g09370.2 sequence type=predicted peptide gene model=Glyma15g09370 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MSVVADNSANNGSHQVVLNVNGDASKKCDDSSNQDCVPLLQKLVAEVVGTYFLIFAGCASVVVNLDKDKVVTQPGISIVWGLTVMVLVYSVGHISGAHFNPAVTIAHATTKRFPLKQVPAYVIAQVVGATLASGTLRLIFNGKSDHFTGTLPGGSDLQSFVVEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAILHHEYRGIWMYLASPILGALAGTWVYTFIRYTNKPVREITRSASFLKGREAE*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
