|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT1G28590 | AT | Annotation by Michelle Graham. TAIR10: GDSL-like Lipase/Acylhydrolase superfamily protein | chr1:10047509-10049300 REVERSE LENGTH=403 | SoyBase | E_val: 3.00E-18 | ISS |
GO:0006629 | GO-bp | Annotation by Michelle Graham. GO Biological Process: lipid metabolic process | SoyBase | N/A | ISS |
GO:0005576 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: extracellular region | SoyBase | N/A | ISS |
GO:0016788 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: hydrolase activity, acting on ester bonds | SoyBase | N/A | ISS |
PTHR22835 | Panther | ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN | JGI | ISS | |
PTHR22835:SF39 | Panther | LATERAL SIGNALING TARGET PROTEIN 2 | JGI | ISS | |
UniRef100_G7IKA6 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: GDSL esterase/lipase n=1 Tax=Medicago truncatula RepID=G7IKA6_MEDTR | SoyBase | E_val: 5.00E-20 | ISS |
UniRef100_I1M1V5 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1M1V5_SOYBN | SoyBase | E_val: 6.00E-36 | ISS |
Glyma15g08760 not represented in the dataset |
Glyma15g08760 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.15g081200 | Wm82.a2.v1 | IGC | As supplied by JGI |
Glyma15g08745 | Wm82.a1.v1.1 | IGC | Correspondences based on a combination of genome sequence coordinate overlap (fjoin) and sequence similarity (ungapped blastn) |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma15g08760.1 sequence type=CDS gene model=Glyma15g08760 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTGTGGGGACGCAGGAGTGGTTGCTTGTGATGATGCTTCACAATATGTTAGTTGGGATGGCTATCATTTGACTGAGGCTGCTTATAGATTGATGACCAAAGGTTTATTAGATGGACCATACACCATTCCTAAATTTAATGTCTCGTGTTTCATAGGTGAAACCATCCGAAATTTTAATGACTATGCAATGAAATAG
>Glyma15g08760.1 sequence type=predicted peptide gene model=Glyma15g08760 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MCGDAGVVACDDASQYVSWDGYHLTEAAYRLMTKGLLDGPYTIPKFNVSCFIGETIRNFNDYAMK*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||