Report for Sequence Feature Glyma15g07300
Feature Type: gene_model
Chromosome: Gm15
Start: 5125043
stop: 5126463
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma15g07300
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G21500 AT
Annotation by Michelle Graham. TAIR10: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05018.1); Has 20 Blast hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr4:11441065-11441712 REVERSE LENGTH=215
SoyBase E_val: 3.00E-14 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0009507 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
UniRef100_I1MEA1 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MEA1_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma15g07300
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma15g07300
Paralog Evidence Comments
Glyma13g32020 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma15g07300 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.15g067400 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma15g07300
Coding sequences of Glyma15g07300
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma15g07300.1 sequence type=CDS gene model=Glyma15g07300 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAGGAGGAGAGCGAGTTTCTTTTAGAAATGAAGCTAATTATCATCTCGTTATGCACTGAAACACTTTCTCTTCTCTCTGTTCACTCTTCCCAACCTCTGTTTTCATGCATTGTCACTTTCTGTTTCTTGATTCTCCTTTATTTGCCTCATCTATTTTGGAAGATAGTTTTCTCACCCGTGCTGATTCTGTCCGGGGTTCTCTTGCTCCTCCTCCTCCGTCTCGGTGCAATTCAGAGGTCTCAAAATGAAGAGAAGAAAAACTCGGTTGAACCAGAACCCATTGCAAACGAAGAAAACAGGGGAAACAGAGAAGAGAAACAGGGGAACCCCATTGAACCGGTGGAAACCGATTCTCTCGATCATGTTTACAGGTGGGTCACGAGCCAATCTCAAAAAGAGATCAAATCTCAAATGGGTTTTCAATCAAGTTCGCGTTTTGACGAGTCTTTCGTGGAGTGGAATGTGAAAGCGCCGTTGGAGGTCATATACGAAGGTGAAGAAACAGAGCAGGATCAGAATGAGAAACGTGACGAGGGTATTTTGAGGTACCCGTCGTTGTCACGGTACTACCCTGAAACTGACTCCGATAGCTCGTCGGAGAGTGAGTTTCCGGCGACGGAGAACTGGGACTCGCCGGAGAACATGTGCTTCAGGTGGGATGAAGAAGACAGAGAAGGGTTAATTGAGATTGCTCTTGACGGTTGCAAGAAGAGGGACGTGGGGTTTCACTTCGATGAGGAGAATTTGATTGAAATTGATATTTCTCCGACGAGGCACAGGGAATTTTCCGGCAAGGACGACCCCTTTTCCGGTGAGATTTGTTGCAATTAG
Predicted protein sequences of Glyma15g07300
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma15g07300.1 sequence type=predicted peptide gene model=Glyma15g07300 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MEEESEFLLEMKLIIISLCTETLSLLSVHSSQPLFSCIVTFCFLILLYLPHLFWKIVFSPVLILSGVLLLLLLRLGAIQRSQNEEKKNSVEPEPIANEENRGNREEKQGNPIEPVETDSLDHVYRWVTSQSQKEIKSQMGFQSSSRFDESFVEWNVKAPLEVIYEGEETEQDQNEKRDEGILRYPSLSRYYPETDSDSSSESEFPATENWDSPENMCFRWDEEDREGLIEIALDGCKKRDVGFHFDEENLIEIDISPTRHREFSGKDDPFSGEICCN*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
