Report for Sequence Feature Glyma15g05220
Feature Type: gene_model
Chromosome: Gm15
Start: 3717945
stop: 3727866
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma15g05220
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G71240 AT
Annotation by Michelle Graham. TAIR10: Plant protein of unknown function (DUF639) | chr1:26855489-26859599 FORWARD LENGTH=823
SoyBase E_val: 0 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005739 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
PF04842 PFAM
Plant protein of unknown function (DUF639)
JGI ISS
UniRef100_I1KUL0 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KUL0_SOYBN
SoyBase E_val: 0 ISS
UniRef100_Q9LS55 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Gb|AAD20392.1 n=1 Tax=Arabidopsis thaliana RepID=Q9LS55_ARATH
SoyBase E_val: 2.00E-76 ISS
Expression Patterns of Glyma15g05220
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma15g05220
Paralog Evidence Comments
Glyma08g19800 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma15g05220 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.15g047100 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma15g05220
Coding sequences of Glyma15g05220
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma15g05220.2 sequence type=CDS gene model=Glyma15g05220 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGGGTCAAAGTTTCCGATGACCCAGTTGGGGATATCGCCCAGATATGTGATTTATCCCCACAGTGCATACAACTACAAGTATTCCAGAAGAATATTCTCAGAGCAAAAGTTCCCGTTCAAGTTCGTGGCGCAGTCCTTAGGGGATAAATGGAAGCTAAATGACATAAGTACTAGTTCTATCCAAGAAAGATGGAATGTATTGATGTCGAGGACCCAAAATTTTTGGAATGAAGTTACCTTTCCACTTGCAAAACCTGGTCAAACTAGGAAGCCTGATCCTGAAAATGATTGTGGATTTCAAGTTATGGAAGACATTTTAATGATAGAGAAGACAATTGACCGCAGAACACCATGTGGGGTTCTTTCTCTAGCTGCTGTGATTTGTATTGAACAATTCAGCAGGATGAATGGATTGACTGGGAAGAAAATGCAGAAAATTTTTGAAGCACTTGTGCCTGAATCTGTATATAATAATGCCCGTAATTTGGTTGAATATTGCTGCTTTAGATTTTTGTCAAGGGATGGTTCTGATATTCATCCTTCCCTCCAGGACCCTGCATTCCAGAGGCTGATATTCATAACCATGCTTGCCTGGGAAAATCCTTACACTAATGACCTTTCCAGCAATGCAGAGAAGGCTTCTTTACAGAATAAACTTGTCACTGAGGAGGCTTTTGTTCGTATTGCTCCTGCAATCTCTGGTGTGGTTGACCGACCCACAGTGCACAATCTTTTTAAGGCACTTGCTGGTGATCAAGAGGGCATTTCTATGAGCTCGTGGCTGAATTACATTAATGAATTTGTCAAAGTGCGTCAAAAACAGATATCATATCAAATTCCAGAGTTTCCTCAACTTTCTGAGGAGAGGATTTTATGCATTGGTTCCAACAGTAAGCGACCTGTTCTGAAATGGGAGAATAATATGGCATGGCCTGGCAAACTTACTCTTACTGATAAGGCAATCTATTTTGAGGCAGTTGGCATACTGGGAAAGAAGAGAGCCATGAGATTGGATCTTATACATGATGGATTACAGGTAGAGAAGGCAAAGGTTGGGCCTTTCGGGTCTGCACTTTTTGACTCTGCTGTTTCTGTTTCTTCTGGCTCAGAGTTGAATCGGTGGGTGCTGGAATTCATCGACTTAGGAGGCGAGATGAGGCGGGATGTTTGGCACGCATTTATAAGTGAAGTCATTGCTTTACACAGGTTCATACGCGAGTATGGACCTGATGATTCTGATGAGTCATTGTTTAAAGTATATGGAGCTCGCAAAGGAAAGGATAGAGCAACAACCACTGCCATTAATGGTATTGCTAGACTCCAAGCCCTTCAACATTTGCGAAAGTTGCTTGATGATCCCACCAAGCTTGTGCAGTTCTCATATTTACAGAATGCACCACACGGTGATATTGTCCTCCAAACTTTAGCTGTTAATTATTGGGGAGGTCCACTAGTTTCAGGATTTATAAATACCCGCAATCAGCCAGAAATTCGCCCTTCTGATGAAATATCTGATAGCCGCAGCCATGTGTTTGACATAGATGGAAGTGTCTACTTGCAGAAGTGGATGAAATCTCCATCTTGGGGGTCTAGTACTTCCACTAATTTTTGGAAGAACACTTCAGTAAAAGGTTTAATATTAAGTAAGAATCTTGTTGTGGCTGATTTATCACTCACAGAAAGAACAGCAAAAACATGCAAACAAAAGTACCACGTTGTGGAGAAGACTCAAGCCACCATTGATGCTGCAACTCTACAAGGCATACCCAGCAACATTGATCTTTTCAAGGAACTAATGTTTCCTTTCACCTTGATTGTCAAAAACTTTGAAAAGCTTAGACACTGGGAGGAGCCACACTTGACCATTGCATTTCTTGGACTCGCCTATACAATAATTTATAGAAACCTGCTGTCATATATGTTTCCCATGATGCTGATGATTTTGGCAGTTGGCATGCTGACAATCAGGGCCCTTAAAGAGCAAGGCCGCCTTGGACGATCTTTTGGTGAAGTCACAATACGTGACCAGCCACCATCCAATACTATACAAAAGATTATTGCTGTAAAAGATGCCATGCGTGATGTTGAGAATTTTATGCAGCAAGTGAATGTCTTCCTCCTCAAAATGCGTTCCATTTTACTTTCTGGCCATCCACAGATAACTACTGAGGTTGCACTGGTGCTGATATCTTCTGCAACCATTCTCCTCATTATCCCGTTCAAGTACATTTTTTCCTTTCTTCTCTTTGATATGTTCACAAGGGAGCTTGAGTTTCGGAGAGAAATGGTTAAAAAGTTCAGAAGTTTTCTAAGGGAGAGGTGGCATACGGTTCCTGCTGTCCCCGTGTCAATTTTACCATTTGAAAATGAAGACAGATCAGAAATTTACTTAAAGGAAATTGAGGACCAATCAAAAACACAAGGAAATCAGAGCAGTGTAAAGTCCAGATAG
Predicted protein sequences of Glyma15g05220
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma15g05220.2 sequence type=predicted peptide gene model=Glyma15g05220 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MGSKFPMTQLGISPRYVIYPHSAYNYKYSRRIFSEQKFPFKFVAQSLGDKWKLNDISTSSIQERWNVLMSRTQNFWNEVTFPLAKPGQTRKPDPENDCGFQVMEDILMIEKTIDRRTPCGVLSLAAVICIEQFSRMNGLTGKKMQKIFEALVPESVYNNARNLVEYCCFRFLSRDGSDIHPSLQDPAFQRLIFITMLAWENPYTNDLSSNAEKASLQNKLVTEEAFVRIAPAISGVVDRPTVHNLFKALAGDQEGISMSSWLNYINEFVKVRQKQISYQIPEFPQLSEERILCIGSNSKRPVLKWENNMAWPGKLTLTDKAIYFEAVGILGKKRAMRLDLIHDGLQVEKAKVGPFGSALFDSAVSVSSGSELNRWVLEFIDLGGEMRRDVWHAFISEVIALHRFIREYGPDDSDESLFKVYGARKGKDRATTTAINGIARLQALQHLRKLLDDPTKLVQFSYLQNAPHGDIVLQTLAVNYWGGPLVSGFINTRNQPEIRPSDEISDSRSHVFDIDGSVYLQKWMKSPSWGSSTSTNFWKNTSVKGLILSKNLVVADLSLTERTAKTCKQKYHVVEKTQATIDAATLQGIPSNIDLFKELMFPFTLIVKNFEKLRHWEEPHLTIAFLGLAYTIIYRNLLSYMFPMMLMILAVGMLTIRALKEQGRLGRSFGEVTIRDQPPSNTIQKIIAVKDAMRDVENFMQQVNVFLLKMRSILLSGHPQITTEVALVLISSATILLIIPFKYIFSFLLFDMFTRELEFRREMVKKFRSFLRERWHTVPAVPVSILPFENEDRSEIYLKEIEDQSKTQGNQSSVKSR*