Report for Sequence Feature Glyma15g01010
Feature Type: gene_model
Chromosome: Gm15
Start: 615670
stop: 617400
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma15g01010
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G80100 AT
Annotation by Michelle Graham. TAIR10: histidine phosphotransfer protein 6 | chr1:30133818-30134652 FORWARD LENGTH=154
SoyBase E_val: 4.00E-61 ISS
GO:0000160 GO-bp
Annotation by Michelle Graham. GO Biological Process: phosphorelay signal transduction system
SoyBase N/A ISS
GO:0009735 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to cytokinin stimulus
SoyBase N/A ISS
GO:0009736 GO-bp
Annotation by Michelle Graham. GO Biological Process: cytokinin mediated signaling pathway
SoyBase N/A ISS
GO:0010089 GO-bp
Annotation by Michelle Graham. GO Biological Process: xylem development
SoyBase N/A ISS
GO:0005739 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion
SoyBase N/A ISS
GO:0004871 GO-mf
Annotation by Michelle Graham. GO Molecular Function: signal transducer activity
SoyBase N/A ISS
GO:0016772 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups
SoyBase N/A ISS
KOG4747
KOG
Two-component phosphorelay intermediate involved in MAP kinase cascade regulation
JGI ISS
PF01627 PFAM
Hpt domain
JGI ISS
UniRef100_G7II71 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Histidine phosphotransfer protein n=1 Tax=Medicago truncatula RepID=G7II71_MEDTR
SoyBase E_val: 5.00E-85 ISS
UniRef100_I1MCF1 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MCF1_SOYBN
SoyBase E_val: 2.00E-109 ISS
Proteins Associated with Glyma15g01010
Locus Gene Symbol Protein Name
PHP3 Root Specific, Phosphotransfer Protein
Expression Patterns of Glyma15g01010
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma15g01010 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.15g007400 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma15g01010
Coding sequences of Glyma15g01010
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma15g01010.1 sequence type=CDS gene model=Glyma15g01010 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGCTTGGTTTCGGTGCGGACCTCTTGTGGGCCGACATGAACCGTCTACTCGCCTTTCTTTTCCACCAGGGAGTGTTGGATGAGCAATTTTTGCAGCTTCAACAGCTGCAAGATGAGGCCTCCCCTAACTTCGTCTCTGAGGTCGTCAACATTTATTTCCACGAGTCCGAGAAGCTACTCACCAATCTCAGAGGATTGCTAATGGAAAGGGAGTACAAGAAAATGGGGATCCATTTGAATCAGTTCATGGGTAGCAGCTCAAGCATTGGTGCCAAGAGAGTCACAAACGTCTGTGCTGCCTTTCGTGCTGCTACTGACCAGAGCAACCGTGCTGGATGCTTGCGAGCGTTGGAGATGCTGGAGCATGAATATTGCTATCTCAAGAACAAATTGCATGAACTGTTCCAAATAGAGCAGCAACGTGCTTTGGTAGCAGGAGTGAGATACCCTGTGCAGAATCAATAA
Predicted protein sequences of Glyma15g01010
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma15g01010.1 sequence type=predicted peptide gene model=Glyma15g01010 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MLGFGADLLWADMNRLLAFLFHQGVLDEQFLQLQQLQDEASPNFVSEVVNIYFHESEKLLTNLRGLLMEREYKKMGIHLNQFMGSSSSIGAKRVTNVCAAFRAATDQSNRAGCLRALEMLEHEYCYLKNKLHELFQIEQQRALVAGVRYPVQNQ*