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Report for Sequence Feature Glyma14g40260
Feature Type: gene_model
Chromosome: Gm14
Start: 49226765
stop: 49229805
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma14g40260
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
UniRef100_E6NTZ5 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: JHL20J20.12 protein n=1 Tax=Jatropha curcas RepID=E6NTZ5_9ROSI
SoyBase E_val: 1.00E-10 ISS
UniRef100_I1MC24 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1MC24_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma14g40260
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma14g40260
Paralog Evidence Comments
Glyma17g37880 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma14g40260 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.14g220400 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma14g40260
Transcripts of Glyma14g40260
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma14g40260.2 sequence type=transcript gene model=Glyma14g40260 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
CTATTTGGCTGAGACGATTCAGATCTTAGGGTTTCTTCTTCTTTTCTTTCTGTGGAGCCCCATTGACCATAGCCGCCAGCCAGAGAGAGAAGAGAAGCCTTCGATCGTAGGTTTTCTTACCCTCCTTTCTCCCAAATCGGGCCTTTCCGCTTCTCGATTCGCTTCCGCAGCTGAGCGATCTGGAAAACCCAGAAAAGAACCAACCGAACGTTTTATATTTTTCGGATAATCAATCAATTGAAGATGTCTCGTTGCTTCCCTTTCCCCCCTCCTGGGTATAGGGCACGTGGCGAGGCCTTGATCAAATCGATTAAGGTTTGTTGAGCCGTTTCGATTTTGCGTTTGTGCTCAACTCTCTCTGCATGTTGTTTCTCTGCATAAAACTGCCACCCCCCCTTTTTGCGCTTGGGTTGTATATTAGTGCCAAACGCTGCCGTTTTAAATGTGTTTTGATCGAACCCTAGAACCCAGATTTGGCCATGTTGTGAGCAAAGATCTGTTGCCCCGCGGTCATTCTCTAAAACTTTTATAATATTATTTAGGGTTTTCTTTTGGGTAATTAGTAAACCGAAATTGTTTTGTGAGACCTAGAAAAAGGGTTTCGGTTTTTATAAGGATTTTATAATGCATGCAGTTCTTCCAAATCACTAACAATTGTTTTTAATAATTGGTGGGTGTTTTTCACCTATGTTGCCTAAAAAACCTGAAATGTTTTTTTTTAAACCAATAATCTCTGTTACGTAAATGGTGAATTCAAATATTGGATCGGTTTTTTGTAGTTAGGATCACGTTAGGTTATATAATCTGAGGTATAAAGATGCGAAATCATATGAAACTCGTTCATTTTGATTAGTGGGTGATTGGGTAATCTTCGATTTTCTCACTCATTGGTAGAAATGACTCAGGTTATTTTACTATTTTGTGGCATGTGATTGCTACTCTCTTGTATATATGAAATAAAATGTAAATAGTTATTGTTCTTGCAATTGTTGAAACGATTGTTCTTGACTACCAAAAGATTTGTAAATTGTAAAGAGATATGAAATAGCTCTAGTTCTTGAATTGCATGGTGAAGCAAAGATTGAAATGCTTGCATAGCATGTTTGTTTCTTTGGACTTCTTCCCTATCATCTATTTGAAAATGTTATTCTGGTGCTTTAAAGCTCCGAGAGGAGATGGAGAAAGCAGAGAAGGACCGGAGGGAGAAGAAGGAGAAGAAAAGGGAAAAGAAAGAGAGGAAAAGAGAGAAGAAGGAGAAGAAAGAGAGAAGGAAAGCGGAGAAAGAAAGGAAACTTAAAGACGGAGCAAGTGCCTGCCCTGGCACTGATGATGGCAAAAAGTTTAAGCTCATCAACGAACTAAAGGAAACCAAAGCAGATGGAAAATTGCAAAAGGGTGAAGACAGTGAGAATGAACAACATGAGAGGAGTGGAATTACAGAGGAACTTGACCTACCTGTCACTTCTGTGGAGCCTTGCTGCCTTTCTGACTGTACTCAAAGCAGTAAGAGAAAAAGGAGCTCCCCAGAATCAACTCATGATCATGGATCTGCTATTAAAATTCGACTTCCGTTGAGGAAGCATAGAGAACCTGAAGAATTGAAATCCAAATCAAAATTTCAAGCGGGGTGTTCTTCTGGAAGTGTGGGGGAAACTGCAAATTCCTTCACTAAAACTACACTTGGAAGTGATCGTCAGTCACAATGTCTCAGGATTACAGAGCTGAATCGGGTACTTGGAAACTCTGATTCAAGACATGGCAAAGCAATGCAGAATTCAGTTCATGGAGATGTTGTGGTCACTAAGAATACCATTGGAAGTAATCGTCAGTCACAATGTCACAGGACTACAGAGCCCAAACATGTTATTGGAAACTCCGGCAAAGTGATGCAGAATTCAGTTCATGGAGATGCTGCGGTCATTAAGAATACCATTGGAAGTGATCGTCAGTCACAATGTCTCAGGACCACAGAGCCCAAACGGGTTCTTGGAAACTCTGGCAAAGTGATGCAGAATTCAGTTCATGGAGATGCTGCGGTCATTAAGAATTCCATTGGAAGTGATTGTCAGTCACAATGTCTCGGGACCACAGTGCCCAAACGGGTTCTTGGGAACTCTGTCAAAGCGATGCAGGCAGTTCATGGAGATGCTGTGGTCACTAAAAAGAACCTTGGAAGTGATCAATACCTCAGGGTTACAGAACCGAAACGGGTTCTTGGAAATTCTGATTCTAGAAATGGCAAAGCAAAGCAGAATCCAGTTCATGGAGATGCCGTTGTCACTAAAAATACCTTTGGAAGTGATCATCAGTTGAAAAGTCTCGAGATTACAGAGCCCAAACGGATTCTTGGAAACTCTGATTCTAAACATTGCAAAGCGTTGCAGAATTTGGTTCCTGGAAGTCAAAAAGTTGAATCTTTGTACGAATCTTTGTTACAGATTCCACCACTAACGTATGATGGATTGGACTCGGTATATGATGATTGGTTATTTAGTTCTGAACCGAAAGAGTCAAGGCCCGTCTCGAAGAAACAGAAGTGTGATTCTGATGTCTTTCAGCTTTCAAATTCTATGTGGCCTCGTGCACAATACTTGCCTGAGGTCGAAGTATATGCGTTGCCATACGCAGTTCCGTTTTGATTCTTTTGGATTATTTTTTGACAATAGGTGGTAGTTTGATGAAAGTAGGGAGCTGTTCTGTGTTCTAATTGAGAACCGGTGGATGATTGTTTTTTTGAAAGAGAAAAACAATTACATGGCATATGGGCAAAGATTGCGTTAATATGTTCAAACATGATCGATGTAATTTTGTCATCCATACTTGGCGGTAGTAGTATTTGTAGAATGCACAGACATAAATATTATAGTAGTAAAACAGTTTTTTAGCAAGTGATTGCGATTATATTAAAATCATTCA
Coding sequences of Glyma14g40260
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma14g40260.1 sequence type=CDS gene model=Glyma14g40260 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGTCTCGTTGCTTCCCTTTCCCCCCTCCTGGGTATAGGGCACGTGGCGAGGCCTTGATCAAATCGATTAAGCTCCGAGAGGAGATGGAGAAAGCAGAGAAGGACCGGAGGGAGAAGAAGGAGAAGAAAAGGGAAAAGAAAGAGAGGAAAAGAGAGAAGAAGGAGAAGAAAGAGAGAAGGAAAGCGGAGAAAGAAAGGAAACTTAAAGACGGAGCAAGTGCCTGCCCTGGCACTGATGATGGCAAAAAGTTTAAGCTCATCAACGAACTAAAGGAAACCAAAGCAGATGGAAAATTGCAAAAGGGTGAAGACAGTGAGAATGAACAACATGAGAGGAGTGGAATTACAGAGGAACTTGACCTACCTGTCACTTCTGTGGAGCCTTGCTGCCTTTCTGACTGTACTCAAAGCAGTAAGAGAAAAAGGAGCTCCCCAGAATCAACTCATGATCATGGATCTGCTATTAAAATTCGACTTCCGTTGAGGAAGCATAGAGAACCTGAAGAATTGAAATCCAAATCAAAATTTCAAGCGGGGTGTTCTTCTGGAAGTGTGGGGGAAACTGCAAATTCCTTCACTAAAACTACACTTGGAAGTGATCGTCAGTCACAATGTCTCAGGATTACAGAGCTGAATCGGGTACTTGGAAACTCTGATTCAAGACATGGCAAAGCAATGCAGAATTCAGTTCATGGAGATGTTGTGGTCACTAAGAATACCATTGGAAGTAATCGTCAGTCACAATGTCACAGGACTACAGAGCCCAAACATGTTATTGGAAACTCCGGCAAAGTGATGCAGAATTCAGTTCATGGAGATGCTGCGGTCATTAAGAATACCATTGGAAGTGATCGTCAGTCACAATGTCTCAGGACCACAGAGCCCAAACGGGTTCTTGGAAACTCTGGCAAAGTGATGCAGAATTCAGTTCATGGAGATGCTGCGGTCATTAAGAATTCCATTGGAAGTGATTGTCAGTCACAATGTCTCGGGACCACAGTGCCCAAACGGGTTCTTGGGAACTCTGTCAAAGCGATGCAGGCAGTTCATGGAGATGCTGTGGTCACTAAAAAGAACCTTGGAAGTGATCAATACCTCAGGGTTACAGAACCGAAACGGGTTCTTGGAAATTCTGATTCTAGAAATGGCAAAGCAAAGCAGAATCCAGTTCATGGAGATGCCGTTGTCACTAAAAATACCTTTGGAAGTGATCATCAGTTGAAAAGTCTCGAGATTACAGAGCCCAAACGGATTCTTGGAAACTCTGATTCTAAACATTGCAAAGCGTTGCAGAATTTGGTTCCTGGAAGTCAAAAAGTTGAATCTTTGTACGAATCTTTGTTACAGATTCCACCACTAACGTATGATGGATTGGACTCGGTATATGATGATTGGTTATTTAGTTCTGAACCGAAAGAGTCAAGGCCCGTCTCGAAGAAACAGAAGTGTGATTCTGATGTCTTTCAGCTTTCAAATTCTATGTGGCCTCGTGCACAATACTTGCCTGAGGTCGAAGTATATGCGTTGCCATACGCAGTTCCGTTTTGA
>Glyma14g40260.2 sequence type=CDS gene model=Glyma14g40260 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAGAAAGCAGAGAAGGACCGGAGGGAGAAGAAGGAGAAGAAAAGGGAAAAGAAAGAGAGGAAAAGAGAGAAGAAGGAGAAGAAAGAGAGAAGGAAAGCGGAGAAAGAAAGGAAACTTAAAGACGGAGCAAGTGCCTGCCCTGGCACTGATGATGGCAAAAAGTTTAAGCTCATCAACGAACTAAAGGAAACCAAAGCAGATGGAAAATTGCAAAAGGGTGAAGACAGTGAGAATGAACAACATGAGAGGAGTGGAATTACAGAGGAACTTGACCTACCTGTCACTTCTGTGGAGCCTTGCTGCCTTTCTGACTGTACTCAAAGCAGTAAGAGAAAAAGGAGCTCCCCAGAATCAACTCATGATCATGGATCTGCTATTAAAATTCGACTTCCGTTGAGGAAGCATAGAGAACCTGAAGAATTGAAATCCAAATCAAAATTTCAAGCGGGGTGTTCTTCTGGAAGTGTGGGGGAAACTGCAAATTCCTTCACTAAAACTACACTTGGAAGTGATCGTCAGTCACAATGTCTCAGGATTACAGAGCTGAATCGGGTACTTGGAAACTCTGATTCAAGACATGGCAAAGCAATGCAGAATTCAGTTCATGGAGATGTTGTGGTCACTAAGAATACCATTGGAAGTAATCGTCAGTCACAATGTCACAGGACTACAGAGCCCAAACATGTTATTGGAAACTCCGGCAAAGTGATGCAGAATTCAGTTCATGGAGATGCTGCGGTCATTAAGAATACCATTGGAAGTGATCGTCAGTCACAATGTCTCAGGACCACAGAGCCCAAACGGGTTCTTGGAAACTCTGGCAAAGTGATGCAGAATTCAGTTCATGGAGATGCTGCGGTCATTAAGAATTCCATTGGAAGTGATTGTCAGTCACAATGTCTCGGGACCACAGTGCCCAAACGGGTTCTTGGGAACTCTGTCAAAGCGATGCAGGCAGTTCATGGAGATGCTGTGGTCACTAAAAAGAACCTTGGAAGTGATCAATACCTCAGGGTTACAGAACCGAAACGGGTTCTTGGAAATTCTGATTCTAGAAATGGCAAAGCAAAGCAGAATCCAGTTCATGGAGATGCCGTTGTCACTAAAAATACCTTTGGAAGTGATCATCAGTTGAAAAGTCTCGAGATTACAGAGCCCAAACGGATTCTTGGAAACTCTGATTCTAAACATTGCAAAGCGTTGCAGAATTTGGTTCCTGGAAGTCAAAAAGTTGAATCTTTGTACGAATCTTTGTTACAGATTCCACCACTAACGTATGATGGATTGGACTCGGTATATGATGATTGGTTATTTAGTTCTGAACCGAAAGAGTCAAGGCCCGTCTCGAAGAAACAGAAGTGTGATTCTGATGTCTTTCAGCTTTCAAATTCTATGTGGCCTCGTGCACAATACTTGCCTGAGGTCGAAGTATATGCGTTGCCATACGCAGTTCCGTTTTGA
Predicted protein sequences of Glyma14g40260
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma14g40260.1 sequence type=predicted peptide gene model=Glyma14g40260 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MSRCFPFPPPGYRARGEALIKSIKLREEMEKAEKDRREKKEKKREKKERKREKKEKKERRKAEKERKLKDGASACPGTDDGKKFKLINELKETKADGKLQKGEDSENEQHERSGITEELDLPVTSVEPCCLSDCTQSSKRKRSSPESTHDHGSAIKIRLPLRKHREPEELKSKSKFQAGCSSGSVGETANSFTKTTLGSDRQSQCLRITELNRVLGNSDSRHGKAMQNSVHGDVVVTKNTIGSNRQSQCHRTTEPKHVIGNSGKVMQNSVHGDAAVIKNTIGSDRQSQCLRTTEPKRVLGNSGKVMQNSVHGDAAVIKNSIGSDCQSQCLGTTVPKRVLGNSVKAMQAVHGDAVVTKKNLGSDQYLRVTEPKRVLGNSDSRNGKAKQNPVHGDAVVTKNTFGSDHQLKSLEITEPKRILGNSDSKHCKALQNLVPGSQKVESLYESLLQIPPLTYDGLDSVYDDWLFSSEPKESRPVSKKQKCDSDVFQLSNSMWPRAQYLPEVEVYALPYAVPF*
>Glyma14g40260.2 sequence type=predicted peptide gene model=Glyma14g40260 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MEKAEKDRREKKEKKREKKERKREKKEKKERRKAEKERKLKDGASACPGTDDGKKFKLINELKETKADGKLQKGEDSENEQHERSGITEELDLPVTSVEPCCLSDCTQSSKRKRSSPESTHDHGSAIKIRLPLRKHREPEELKSKSKFQAGCSSGSVGETANSFTKTTLGSDRQSQCLRITELNRVLGNSDSRHGKAMQNSVHGDVVVTKNTIGSNRQSQCHRTTEPKHVIGNSGKVMQNSVHGDAAVIKNTIGSDRQSQCLRTTEPKRVLGNSGKVMQNSVHGDAAVIKNSIGSDCQSQCLGTTVPKRVLGNSVKAMQAVHGDAVVTKKNLGSDQYLRVTEPKRVLGNSDSRNGKAKQNPVHGDAVVTKNTFGSDHQLKSLEITEPKRILGNSDSKHCKALQNLVPGSQKVESLYESLLQIPPLTYDGLDSVYDDWLFSSEPKESRPVSKKQKCDSDVFQLSNSMWPRAQYLPEVEVYALPYAVPF*