Report for Sequence Feature Glyma14g39460
Feature Type: gene_model
Chromosome: Gm14
Start: 48556281
stop: 48559895
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma14g39460
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G23380 AT
Annotation by Michelle Graham. TAIR10: Protein of Unknown Function (DUF239) | chr4:12214667-12216333 REVERSE LENGTH=400
SoyBase E_val: 2.00E-68 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005576 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: extracellular region
SoyBase N/A ISS
PF03080 PFAM
Arabidopsis proteins of unknown function
JGI ISS
UniRef100_G7K1S5 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Carboxyl-terminal proteinase n=1 Tax=Medicago truncatula RepID=G7K1S5_MEDTR
SoyBase E_val: 4.00E-137 ISS
UniRef100_I1MBV1 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1MBV1_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma14g39460
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma14g39460 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.14g213800 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma14g39460
Coding sequences of Glyma14g39460
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma14g39460.2 sequence type=CDS gene model=Glyma14g39460 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGATGAATATATTTCTCTTTGTCTTGTGTTTAGTGATCAACGGTGGCATTCATAAAGTTCATGGTATTCAAAATACATTGAAAGAAGATTTAGAGTTGGAAAGACAACAACAACTCATTAACAAGCCTCATATCAAGAGTATTCGGACAAAGTTTGGGGAGATTATTGATTGCATTGATATTAACAAGCAACCAGCATTTGACCATCCTTTACTAAAAAATCATAAGTTGCAGAGAAAGCCCAACTTTAAAATATCAAGTGTAAAAGATTCAACGACTAGATTTATATTTGGGCTGAAAAAAGATCAATACTGTCCAAGTGGAACCGTTCCTATTCAAAGAATAACAAAAGGGGATTTGATTGGAGACAAATTATTAAATAGTCACACCCTAACTCAAAGCACTCCTGGTGATCATTTTGCAGAAGTATCTCTTGTACCAGGTTTAGGTCCTTATTATGGAGTTAGTGGTTCATTAAGCGTTTATAATCCAAAAGTTGAGAAGGATCAAATCAGCGCTTCTACTTTATGGGTTCAAAATGGAGATGCGAATAGAATCGAGTTTGGATGGCATGTGAATCCAAGTTTATATGGCGATGATACAACTTATATTTACTCACGTTGGACGAGAGATAACTACAAGCAAACAGGATGTTTCAACATGCAATGTCCAGGTTTTGTTCAAACTCACAAAGGAATCTATCTTGGTACACGAGTGGACAATACATCCATCTATGGTGGAACGATTGTTGAGGCTAATGTTTCTATTGCCCAGGACCCAATTACCAAGAGTTGGTGGTTAAGTTTGGAAAGTACAACTATTGGATATTTTCCTATAGCATTGTTCTCCAACTTGACTTCGGCCGAGCAAGGGGGGTGGGGTGGGAGAACACATGCTCCTCCTGGTGCTCCTAGTCCTCCAATGGGATCTGGTTATTTTCCTGATGATAACTTAGTTCATGCATGCTATTTTAGGCAGGTCTCATTCAAGAATGGATCAATACAAGACTATGGACCTGAGGAATATCATGTACACACAAACACCGATAACCCTAGTTGTTTTGGTGTTGAATATTATGGAGATCAAGGAAGACAAGCCGGGTATTCTCTCCAATTTGGAGGACCTGGGGGCAATTGTGATAATTAA
Predicted protein sequences of Glyma14g39460
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma14g39460.2 sequence type=predicted peptide gene model=Glyma14g39460 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MMNIFLFVLCLVINGGIHKVHGIQNTLKEDLELERQQQLINKPHIKSIRTKFGEIIDCIDINKQPAFDHPLLKNHKLQRKPNFKISSVKDSTTRFIFGLKKDQYCPSGTVPIQRITKGDLIGDKLLNSHTLTQSTPGDHFAEVSLVPGLGPYYGVSGSLSVYNPKVEKDQISASTLWVQNGDANRIEFGWHVNPSLYGDDTTYIYSRWTRDNYKQTGCFNMQCPGFVQTHKGIYLGTRVDNTSIYGGTIVEANVSIAQDPITKSWWLSLESTTIGYFPIALFSNLTSAEQGGWGGRTHAPPGAPSPPMGSGYFPDDNLVHACYFRQVSFKNGSIQDYGPEEYHVHTNTDNPSCFGVEYYGDQGRQAGYSLQFGGPGGNCDN*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
