Glyma14g38533 - SoyBase

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Report for Sequence Feature Glyma14g38533

Feature Type:	gene_model
Chromosome:	Gm14
Start:	47660448
stop:	47676075
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g38533

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G05400	AT	Annotation by Michelle Graham. TAIR10: LRR and NB-ARC domains-containing disease resistance protein \| chr5:1597745-1600369 REVERSE LENGTH=874	SoyBase	E_val: 4.00E-56	ISS
GO:0006499	GO-bp	Annotation by Michelle Graham. GO Biological Process: N-terminal protein myristoylation	SoyBase	N/A	ISS
GO:0006826	GO-bp	Annotation by Michelle Graham. GO Biological Process: iron ion transport	SoyBase	N/A	ISS
GO:0006952	GO-bp	Annotation by Michelle Graham. GO Biological Process: defense response	SoyBase	N/A	ISS
GO:0010106	GO-bp	Annotation by Michelle Graham. GO Biological Process: cellular response to iron ion starvation	SoyBase	N/A	ISS
GO:0010167	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to nitrate	SoyBase	N/A	ISS
GO:0015706	GO-bp	Annotation by Michelle Graham. GO Biological Process: nitrate transport	SoyBase	N/A	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0043531	GO-mf	Annotation by Michelle Graham. GO Molecular Function: ADP binding	SoyBase	N/A	ISS
KOG4658	KOG	Apoptotic ATPase	JGI		ISS
PTHR23155	Panther	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	JGI		ISS
PTHR23155:SF121	Panther	SUBFAMILY NOT NAMED	JGI		ISS
PF00931	PFAM	NB-ARC domain	JGI		ISS
UniRef100_G7K8F2	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Cc-nbs-lrr resistance protein n=1 Tax=Medicago truncatula RepID=G7K8F2_MEDTR	SoyBase	E_val: 0	ISS
UniRef100_I1MBL1	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MBL1_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma14g38533

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g38533 not represented in the dataset	Glyma14g38533 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g38533 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g204700	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma14g38533

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma14g38533

Limit To All Plant Sequences

>Glyma14g38533.1   sequence type=CDS   gene model=Glyma14g38533   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGGGATATCGTTCTTTCCATCGTAGCAAAGTTAGCAGAATATACAGTGGGCCCTATTTTACACCATGCTCAATACTTGTGTTGTTTCAACAACATTGCTGGGAATCTTCCAAATGCCAAGGAAGAATTGGAATTAACCCGAAACAGTGTGAAGGAACGAGTTGAAGAAGCTATTATGAGGACTGAAAAAATTGAACCAGCAGTTGAGAAGTGGCTGAAAGATGTTGAGAAAGTCTTAGAAGAAGTGCATATGCTTCAAGGAAGAATTTCGGAAGTCAGCAAGAGCTATTTCAGAAGGCAATTCCAATATTTTCTTACAAAAGAAATAGCAAGAAAAATTGAGAAAATGGCTCAACTCAACCACAACAGCAAGTTTGAGCCATTTTCTAAGATTGCCGAACTTCCAGGCATGAAGTACTATTCATCCAAAGATTTTGTTCGTTTCAAATCAAGAGAATCGACTTATGAGAACCTTTTGGAAGCATTAAAGGATAAAAGCGCTTGCACGATTGGACTAATTGGACTAGGAGGCTCAGGAAAAACTACTTTGGCGAAAGAGGTTGGTAAGAAAGCTGAGGAGTTAAAACTTTTTGAGAAGGTTGTCATGGCAACAGTCTCTCAAACTCCAAATATCACAAGCATCCAAATGCAAATTGCTGATAAGTTGGGTTTGAAATTTGAGGAAAAAACAGAGGAAGGTAGAGCACAAAGACTATCAGAGAGATTAAGGACAGGCACAACTCTACTAATCTTGGATGATGTATGGGAAAAGCTAGAATTTGAGGCTATTGGTATTCCATACAATGAAAACAACAAGGGCTGTGGAGTAATTTTAACCACTCGGAGTAGAGAAGTATGCATTTCCATGCAATGCCAAACAATAATTGAGCTTATTCTCTTAGCTGGCAATGAAGCTTGGGATTTGTTCAAATTGAATGCAAACATAACTGATGAGTCCCCATATGCATTGAAAGGCGTTGCAACAAAAATTGTAGATGAATGCAAAGGATTGGCTATTGCAATTGTGACGGTGGGAAGCACACTGAAGGGCAAAACTGTTAAAGAGTGGGAATTAGCATTGTCAAGACTAAAAGATTCTGAACCACTAGATATTCCAAAAGGCTTAAGAAGTCCTTATGCCTGTCTTGGATTGAGTTATGATAATTTGACCAATGAATTAGCCAAGTCCTTGTTCTTGTTGTGTTCTATATTTCCAGAGGATCATGAAATTGATTTGGAAGATTTATTTCGATTTGGAAAGGGAATGGGCCTACCTGGGACTTTTGGAACAATGGAGAAAGCAAGGAGGGAGATGCAGATAGCTGTTAGCATCCTCATTGATTGTTATTTGTTGTTGGAGGCCAGTAAAAAAGAAAGGGTGAAAATGCATGACATGGTTCGTGATGTAGCCTTGTGGATAGCATCTAAAACTGGTAAAGCAATTTTGGCAAGTACTGGAATGGATCCAAGAATGTTGTTAGAGGATGAAACCATAAAAGATAAGAGAGTAATATCCTTGTGGGATTTGAAAAATGGCCAGCTTCTTATTGATGATCAATTGAATTGTCCATCACTTGAAATTCTCTTGTTTCATTCTCCCGAGGTTGACTTTGATGTATCAAATACTTGTTTAGAAAGGCTAAAAATGATTAAAATCCTGGCAATCTTAACATCTAGCTATAATTGGCGTAGGCGTGAATTGAAGATGCCATCTAGCTATAATTTCCTTAGGCGTGAATTGAACAAGGCATGTGGTACATCGTATCTCTCCTTGTCACTGCCACAATCAATGGAGTCATTACAAAATCTTCATACTCTGTGCTTGAGAGGTTATGAATTAGGTGACATCTCCATTTTGGAAAGCCTACAAGCACTTGAGGTTCTTGACTTGCGTGGTTCTTCTTTTATAGAATTGCCTAATGGAATCGCGTCATTAAAGAAATTGAAGCTTCTGGATTTGTTCCATTGTTCCATTCAGGAAAATAATGCTTACGAGGTTATAGGAAGATGTATGCAGCTGAATGAATTGTATTTGTCTATACCTTCATATGCAAATGAGGAATTTCCGCATAATATCTCCTTCTCAAGATTAGAGAGGTATGTTTTAATTTTTAAAATGTACACCCAGAGCTGGCTGACTGACATGATGGAAGGCATGATGGAAGAACATAGACCATGTAGAGCTTTATGCATAAATGGTTTTAATGCCTCAGTTCAAAGTTTTATATCATTACCAATCAAGGATTTCTTTCAAAAAGCAGAGTATCTTCATTTGGAGAACCTTGAGGGAGGTTACGAAAATGTAATCCCATCCATGGTTCCACAAGGCATGAATCACTTGATTTTCCTAATCCTCCATGATTGTCCAGAGATAAAATGCGTCTTTGATAGTACCAATGTTGATCTGCTGCAAACTGAAGATGCGTTCTCCAGCCTAGTCATTTTAAGCTTGTATGGATTGGATAACCTTGAAGAAGTGTTTAATGACCCCTCTTCCAGATGTTCTCTCAAAAGTTTAGAAGAGCTAACCATAGAGAGGTGTAGACAATTGTACAATATTTCCTTTCCCAAGAACTCAAAGCTATGCCATCTCAAGTCCTTGACAATAAGAGATTGCCCGATGCTAACTTGTATCTTCAAGCCATCCACTGTCCAAACTCTAGAGCTGCTAGAACAAGTGAGAATATCTGAATGCTATGAATTGAAGCAGATAATAGAAGAAGTGGAAGAAGGGAGTGTTGATTATGTTAGCAGTCAAAGTCATACCTCTTTGATGCTCCCAAAATTAAGGACACTTACTATTCGTGGATGTCGCAGCTTGAAATATATATTCCCTATGTGTTATGCTCATGGGCTAGTAAGTTTGGAAAAGCTGATGGTTGAACGCTGTGATAAGTTGAAGTATGTATTTGGCAGTGAAAAGGAACATGATCTTACAGTGTACCAGCACCAGAGTCATCCTCAGACTAATTTGGAAACTCTACGGTTGACTCAGTTGCCGAATTTGGTTGAGATTTGGCCTAAATATTTTGATCCACATTTACCAAATTCGAAAGAGCTACACTGCATTGATTGTCCAAGACTGCCTGACTCTTGGGTGCGTAGGGGGATGATTATTGATTCAGATCTGCAACAAGACTCAACTACAACGGAGAAGGAATTACTATGCTCGGTTACCACCACATTCAACCAATTATCCGATCTAGTGCTTTCCTCTAAACTTAGAGAACTTGGATTGTCTGGTGTTGGAGTAAAAGGTCTTTTCCAATTCCAAATCAGAGAACATGGGAGCAACACAGAACTTGCTCCTTTAAACTTGGATCTAACTCATGCTGACTTGTGGGATCTACCTGAGCTCGAGTTCATATGGAAGGGCCCCACAAATTTTCTAAGCCTCCAGATGCTTGACGTGATTAATGTGAATAGATGTCCAAAATTGAAAACCATCTTCTCCCCTACCATTGTTAGAAGCTTACCAATGCTGGGAAGACTGCAAATAATTGATTGTGAGGAATTAGAGCAAATATTTGATTCAGGTGATGCACAAAGCCTATATACTTGTTCACAACAAGTGTGCTTCCCAAATCTCTATTATATTAGTGTCAAAAAGTGCAACAAGTTGAAATACCTTTTTCATAATTTTGTGGCTGGTCACTTTCACAATCTGTCCAAGTTGGAGATAGAAGACTGCTCTGAGTTACAGAAGGTTTTTGCTTTTGAATGTGAAACTGATGACGATGGTCAAGAGGGGATTGTTAAGGATGGAGAAAAAGTACTACTACGTAACCTGTTATATATAACACTCAGCAGTTTGCCAAACTTCAAAGAGATTCACCATGGATTCAAGTATGATGTTATGCAACATGACATAACTGATTGTCCTAAATATTCTCCAAGTTTATATCTACACACAGAAGAGTAA

Predicted protein sequences of Glyma14g38533

Limit To All Plant Sequences

>Glyma14g38533.1   sequence type=predicted peptide   gene model=Glyma14g38533   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGDIVLSIVAKLAEYTVGPILHHAQYLCCFNNIAGNLPNAKEELELTRNSVKERVEEAIMRTEKIEPAVEKWLKDVEKVLEEVHMLQGRISEVSKSYFRRQFQYFLTKEIARKIEKMAQLNHNSKFEPFSKIAELPGMKYYSSKDFVRFKSRESTYENLLEALKDKSACTIGLIGLGGSGKTTLAKEVGKKAEELKLFEKVVMATVSQTPNITSIQMQIADKLGLKFEEKTEEGRAQRLSERLRTGTTLLILDDVWEKLEFEAIGIPYNENNKGCGVILTTRSREVCISMQCQTIIELILLAGNEAWDLFKLNANITDESPYALKGVATKIVDECKGLAIAIVTVGSTLKGKTVKEWELALSRLKDSEPLDIPKGLRSPYACLGLSYDNLTNELAKSLFLLCSIFPEDHEIDLEDLFRFGKGMGLPGTFGTMEKARREMQIAVSILIDCYLLLEASKKERVKMHDMVRDVALWIASKTGKAILASTGMDPRMLLEDETIKDKRVISLWDLKNGQLLIDDQLNCPSLEILLFHSPEVDFDVSNTCLERLKMIKILAILTSSYNWRRRELKMPSSYNFLRRELNKACGTSYLSLSLPQSMESLQNLHTLCLRGYELGDISILESLQALEVLDLRGSSFIELPNGIASLKKLKLLDLFHCSIQENNAYEVIGRCMQLNELYLSIPSYANEEFPHNISFSRLERYVLIFKMYTQSWLTDMMEGMMEEHRPCRALCINGFNASVQSFISLPIKDFFQKAEYLHLENLEGGYENVIPSMVPQGMNHLIFLILHDCPEIKCVFDSTNVDLLQTEDAFSSLVILSLYGLDNLEEVFNDPSSRCSLKSLEELTIERCRQLYNISFPKNSKLCHLKSLTIRDCPMLTCIFKPSTVQTLELLEQVRISECYELKQIIEEVEEGSVDYVSSQSHTSLMLPKLRTLTIRGCRSLKYIFPMCYAHGLVSLEKLMVERCDKLKYVFGSEKEHDLTVYQHQSHPQTNLETLRLTQLPNLVEIWPKYFDPHLPNSKELHCIDCPRLPDSWVRRGMIIDSDLQQDSTTTEKELLCSVTTTFNQLSDLVLSSKLRELGLSGVGVKGLFQFQIREHGSNTELAPLNLDLTHADLWDLPELEFIWKGPTNFLSLQMLDVINVNRCPKLKTIFSPTIVRSLPMLGRLQIIDCEELEQIFDSGDAQSLYTCSQQVCFPNLYYISVKKCNKLKYLFHNFVAGHFHNLSKLEIEDCSELQKVFAFECETDDDGQEGIVKDGEKVLLRNLLYITLSSLPNFKEIHHGFKYDVMQHDITDCPKYSPSLYLHTEE*

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