Glyma14g38301 - SoyBase

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Report for Sequence Feature Glyma14g38301

Feature Type:	gene_model
Chromosome:	Gm14
Start:	47453490
stop:	47455476
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g38301

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G21480	AT	Annotation by Michelle Graham. TAIR10: Exostosin family protein \| chr1:7519372-7521426 REVERSE LENGTH=410	SoyBase	E_val: 4.00E-11	ISS
GO:0008150	GO-bp	Annotation by Michelle Graham. GO Biological Process: biological process	SoyBase	N/A	ISS
GO:0005768	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: endosome	SoyBase	N/A	ISS
GO:0005794	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: Golgi apparatus	SoyBase	N/A	ISS
GO:0005802	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: trans-Golgi network	SoyBase	N/A	ISS
GO:0016020	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: membrane	SoyBase	N/A	ISS
GO:0003824	GO-mf	Annotation by Michelle Graham. GO Molecular Function: catalytic activity	SoyBase	N/A	ISS
PF03016	PFAM	Exostosin family	JGI		ISS
UniRef100_F4HY11	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Exostosin-like protein n=1 Tax=Arabidopsis thaliana RepID=F4HY11_ARATH	SoyBase	E_val: 2.00E-08	ISS
UniRef100_UPI000233B574	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI000233B574 related cluster n=1 Tax=unknown RepID=UPI000233B574	SoyBase	E_val: 3.00E-65	ISS

Expression Patterns of Glyma14g38301

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g38301 not represented in the dataset	Glyma14g38301 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g38301 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g202500	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma14g38301

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma14g38301

Limit To All Plant Sequences

>Glyma14g38301.1   sequence type=CDS   gene model=Glyma14g38301   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTGGCATATCTGGAGGCCATCAACCACATCTTTGTTTTCCCAGAGGAGCTGGTGCTCCCCTTTTTCAAATCATGGGCAACATGTGTATATTATAAAGATATGGGAAAGAGGTGGTATATTCTTGTGGAATATGTTCCAGTTATATTATCATATCAAACAGAATTTCCATACCAGAATGTCTTTTATCATAGTCAGATATCAATAAAATGGCCATTTACTCGAATAGGTCTTGAAACATTGCAGTACCAGGAATCTATATCACAAATACCCCTCTTACATATAAAAAATAAATAG

Predicted protein sequences of Glyma14g38301

Limit To All Plant Sequences

>Glyma14g38301.1   sequence type=predicted peptide   gene model=Glyma14g38301   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MLAYLEAINHIFVFPEELVLPFFKSWATCVYYKDMGKRWYILVEYVPVILSYQTEFPYQNVFYHSQISIKWPFTRIGLETLQYQESISQIPLLHIKNK*

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