Report for Sequence Feature Glyma14g37810
Feature Type: gene_model
Chromosome: Gm14
Start: 47109819
stop: 47112839
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma14g37810
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G30210 AT
Annotation by Michelle Graham. TAIR10: laccase 3 | chr2:12887735-12889827 REVERSE LENGTH=570
SoyBase E_val: 0 ISS
GO:0046274 GO-bp
Annotation by Michelle Graham. GO Biological Process: lignin catabolic process
SoyBase N/A ISS
GO:0055114 GO-bp
Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process
SoyBase N/A ISS
GO:0005576 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: extracellular region
SoyBase N/A ISS
GO:0048046 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: apoplast
SoyBase N/A ISS
GO:0005507 GO-mf
Annotation by Michelle Graham. GO Molecular Function: copper ion binding
SoyBase N/A ISS
GO:0016491 GO-mf
Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity
SoyBase N/A ISS
GO:0052716 GO-mf
Annotation by Michelle Graham. GO Molecular Function: hydroquinone:oxygen oxidoreductase activity
SoyBase N/A ISS
KOG1263
KOG
Multicopper oxidases
JGI ISS
PTHR11709 Panther
MULTI-COPPER OXIDASE
JGI ISS
PTHR11709:SF9 Panther
LACCASE
JGI ISS
PF00394 PFAM
Multicopper oxidase
JGI ISS
PF07731 PFAM
Multicopper oxidase
JGI ISS
PF07732 PFAM
Multicopper oxidase
JGI ISS
UniRef100_G7JZP3 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Laccase-like multicopper oxidase n=1 Tax=Medicago truncatula RepID=G7JZP3_MEDTR
SoyBase E_val: 0 ISS
UniRef100_I1MBG2 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MBG2_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma14g37810
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma14g37810
Paralog Evidence Comments
Glyma02g39750 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma14g37810 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.14g198900 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma14g37810
Coding sequences of Glyma14g37810
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma14g37810.1 sequence type=CDS gene model=Glyma14g37810 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAAGACTTACCACCTCCCTGGAAAGTCATGGTTCTCTTGGTTCTTACTTGGCCTACTTTCAATCATTGCTTCCCTTGCTTCAGCTGCAGAGAATCATTACCATGAGTTTGTTATCCAAACTGTGCCAGTGAAGAGGCTGTGCAGAACCCAAAACATACTCACAGTAAATGGGCAGTTTCCTGGCCCAACAGTGGAAGCAAGAAATGGAGATTCTCTTGCAATCAAAGTAGTAAATGCTGGACCATACAACATCTCCATCCACTGGCATGGATTAAGGATGTTGAGAAATCCATGGGCAGATGGGCCTAGTTATGTGACTCAGTGTCCCATTCAACCAGGGGGAAGTTACACATACCGCTTTACAATCCAAAACCAAGAGGGGACACTATGGTGGCATGCTCACACTGGCTTCCTAAGAGCCACTGTGTATGGAGCTCTCATCATTTATCCAAAATTGGGTTCTCCTTATCCTTTCTCTATGCCTAAGAGAGAATATCCCCTCCTTCTAGCGGAATGGTTTGATAGGGATCCAATGGTTCTCTTAAGGCAGACACAATTCACAGGAGCACCTCCAAATGTATCTGTTGCATACACAATTAATGGTCAACCTGGAGATCTCTATAGATGTTCAAGTCAAGAAACTGTGCGAGTTCCGGTAGATGCTGGCGAGACAATTCTCTTGAGAATCATCAACAGTGCACTCAACCAAGAACTCTTCTTCGCAATTGCCAACCACAGGATGACTGTTGTTGCTACAGATGCTGCTTACACCAAGCCTTTCACCACCAATGTCCTCATGATTGGTCCTGGTCAGACAATCAATGTCCTGGTCACTGCTGATCAAACCCCCGGGCGATACTACATGGCAGCACGCGCATATCAAACTGCGATGAATGCTGCATTTGACAACACTACCACCACTGCAATCCTAGAATACAAATCAGCCAGCTGCAGCAAAAAAAATGGACAACTTCCTAGACCAATACTGCCAGTATTGCCGGCTTTCAATGATACTGCCACTGCAACAGCATACACAACTGGGATCAGAGGCCTTTCCAAAATCAATGTCTTCACAAAAGTTGATGTGAACCTATACTTCATTGTTGGGTTGGGGCTAATCAACTGCACAAATCCTAATAGTCCAAGGTGCCAAGGACCAAATGGAACCCGATTCGCGGCCAGCATAAACAATCATTCCTTTGTGCTCCCAACAACCACCTCCTTAATGCAAGCCTACTATAACGGTATCCCTGGTGTCTTCACCACAGATTTTCCTCCAGTTCCTCCTTTACAATTCAATTACACCGGCAATGTACCCCGGGGACTGTGGACTCCTGCCAGAGGAACTAAGCTCTTCAAGTTGAAGTATGGTTCCAATGTTCAAATTGTTCTGCAGGACACAAGCATAGTGACTACTGAGGATCACCCTATGCATATTCATGGATTCCACTTCTTTGTAGTTGGTTCCGGCTTTGGCAACTTCAACCCAGCAACAGATCCTGCAAGGTTTAACCTTGTAGACCCACCTGTGAGGAACACCATTGGAACACCACCAGGAGGATGGGTGGCCATTCGTTTTGTGGCTGATAATCCAGGAATTTGGTTCTTGCATTGTCACATAGACTCACATCTGAATTGGGGTCTGGCAACGGCACTTTTGGTAGAGAATGGAGTTGGTCCATCACAGTCAGTTATTCCTCCACCCCCGGATCTGCCTCAGTGTTAA
Predicted protein sequences of Glyma14g37810
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma14g37810.1 sequence type=predicted peptide gene model=Glyma14g37810 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MKTYHLPGKSWFSWFLLGLLSIIASLASAAENHYHEFVIQTVPVKRLCRTQNILTVNGQFPGPTVEARNGDSLAIKVVNAGPYNISIHWHGLRMLRNPWADGPSYVTQCPIQPGGSYTYRFTIQNQEGTLWWHAHTGFLRATVYGALIIYPKLGSPYPFSMPKREYPLLLAEWFDRDPMVLLRQTQFTGAPPNVSVAYTINGQPGDLYRCSSQETVRVPVDAGETILLRIINSALNQELFFAIANHRMTVVATDAAYTKPFTTNVLMIGPGQTINVLVTADQTPGRYYMAARAYQTAMNAAFDNTTTTAILEYKSASCSKKNGQLPRPILPVLPAFNDTATATAYTTGIRGLSKINVFTKVDVNLYFIVGLGLINCTNPNSPRCQGPNGTRFAASINNHSFVLPTTTSLMQAYYNGIPGVFTTDFPPVPPLQFNYTGNVPRGLWTPARGTKLFKLKYGSNVQIVLQDTSIVTTEDHPMHIHGFHFFVVGSGFGNFNPATDPARFNLVDPPVRNTIGTPPGGWVAIRFVADNPGIWFLHCHIDSHLNWGLATALLVENGVGPSQSVIPPPPDLPQC*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
