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Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT3G10850 | AT | Annotation by Michelle Graham. TAIR10: Metallo-hydrolase/oxidoreductase superfamily protein | chr3:3397756-3399522 REVERSE LENGTH=258 | SoyBase | E_val: 4.00E-150 | ISS |
| GO:0006623 | GO-bp | Annotation by Michelle Graham. GO Biological Process: protein targeting to vacuole | SoyBase | N/A | ISS |
| GO:0019243 | GO-bp | Annotation by Michelle Graham. GO Biological Process: methylglyoxal catabolic process to D-lactate | SoyBase | N/A | ISS |
| GO:0019288 | GO-bp | Annotation by Michelle Graham. GO Biological Process: isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway | SoyBase | N/A | ISS |
| GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
| GO:0005829 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytosol | SoyBase | N/A | ISS |
| GO:0004416 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: hydroxyacylglutathione hydrolase activity | SoyBase | N/A | ISS |
| GO:0008270 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: zinc ion binding | SoyBase | N/A | ISS |
| GO:0016787 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: hydrolase activity | SoyBase | N/A | ISS |
| KOG0813 | KOG | Glyoxylase | JGI | ISS | |
| PTHR11935 | Panther | BETA LACTAMASE DOMAIN | JGI | ISS | |
| PTHR11935:SF7 | Panther | GLYOXYLASE-RELATED | JGI | ISS | |
| PF00753 | PFAM | Metallo-beta-lactamase superfamily | JGI | ISS | |
| UniRef100_G7KDB9 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Hydroxyacylglutathione hydrolase n=1 Tax=Medicago truncatula RepID=G7KDB9_MEDTR | SoyBase | E_val: 4.00E-164 | ISS |
| UniRef100_I1MB50 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MB50_SOYBN | SoyBase | E_val: 0 | ISS |
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Glyma14g36610 not represented in the dataset |
Glyma14g36610 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.14g187700 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma14g36610.2 sequence type=transcript gene model=Glyma14g36610 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high TATATATATATATATAAATGATATAATATATAAGGTAAGGGTGTGGAATGGTTGGCTTGTTGGTAGAAGAAATTGGGCGTGTGGGAGTTGTTGAATCGGGAAGCAAAAAAAATGAGAATCCATCACATAGCATGCCTCCAAGACAATTATTCCTATCTGATCGTAGACGAGAGCACGAAGGAAGCCGCGGCGGTGGACCCGGTCGAACCGGAGAAGGTTCTTGAAGTTGCCAGCTCGCACGGCCTCACTCTCAAATTCGTCCTCACCACCCACCATCACTGGGATCATGCTGGTGGAAACGACAAGATAAAGCAGCTGGTGCCAGGAATCAAAGTCTATGGTGGTTCCATTGAAAACGTCAAGGGTTGCACTGACAAAGTTGAAAACGGTGATAAGGTCTCTCTTGGAGCTGAAATCACTATATTGGCCCTTCACACTCCTTGCCACACACAAGGTCATATAAGTTACTATGTTACTGGCAAAGAGGATGAGCAACCGGCTGTTTTTACTGGAGATACATTGTTTATTGCTAGTTGTGGGAAATTTTTTGAAGGAACTGCAGAACAGATGTATCAGTCACTTAATGTAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGTTGATGAGGATGTATATCTAATTTGATGGCGAAGATGTTGTGCTAGCTCCCTGAATTCTTTCAGCATCTTGGGTCAATCCACAAAATATGTGTGAACTAGTTGAGGATGTTAGTGGTGCTACCCTAGGAATTGTTGGTTGTGAAGGTGTAAACAGTCCTAAATAAGCTTTTTTAAGCTAGTCCACACATGTTAATATTTTGTAAAAGTGTATAGTATGGTGAATGCAAGGATTATATTTCCATTTGTGCAGCATAGAGTAGTCAGTTTGATATGAATATAACAGAATAAGAACTCGTGCTGAAGTTAGGGTCATTAAGTATTCACGAATACTGTTTCC
>Glyma14g36610.1 sequence type=CDS gene model=Glyma14g36610 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGAGAATCCATCACATAGCATGCCTCCAAGACAATTATTCCTATCTGATCGTAGACGAGAGCACGAAGGAAGCCGCGGCGGTGGACCCGGTCGAACCGGAGAAGGTTCTTGAAGTTGCCAGCTCGCACGGCCTCACTCTCAAATTCGTCCTCACCACCCACCATCACTGGGATCATGCTGGTGGAAACGACAAGATAAAGCAGCTGGTGCCAGGAATCAAAGTCTATGGTGGTTCCATTGAAAACGTCAAGGGTTGCACTGACAAAGTTGAAAACGGTGATAAGGTCTCTCTTGGAGCTGAAATCACTATATTGGCCCTTCACACTCCTTGCCACACACAAGGTCATATAAGTTACTATGTTACTGGCAAAGAGGATGAGCAACCGGCTGTTTTTACTGGAGATACATTGTTTATTGCTAGTTGTGGGAAATTTTTTGAAGGAACTGCAGAACAGATGTATCAGTCACTTAATGTAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTGAGGATACAACAAAAATTAACCTGGGCTCGGAATCAACGACAAGCTGGCCAAGCAACAATTCCCTCAACCATTGAGGATGAGTTGGAGACCAATCCCTTTATGAGGGTTGATCTACCTGAGATCCAGGAGAGGGTGGGCTGCAAGTCACCTGTTGAAGCATTAGGAGAGATAAGGAAGCAGAAAGACAATTGGAGAGGCTAA >Glyma14g36610.2 sequence type=CDS gene model=Glyma14g36610 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGAGAATCCATCACATAGCATGCCTCCAAGACAATTATTCCTATCTGATCGTAGACGAGAGCACGAAGGAAGCCGCGGCGGTGGACCCGGTCGAACCGGAGAAGGTTCTTGAAGTTGCCAGCTCGCACGGCCTCACTCTCAAATTCGTCCTCACCACCCACCATCACTGGGATCATGCTGGTGGAAACGACAAGATAAAGCAGCTGGTGCCAGGAATCAAAGTCTATGGTGGTTCCATTGAAAACGTCAAGGGTTGCACTGACAAAGTTGAAAACGGTGATAAGGTCTCTCTTGGAGCTGAAATCACTATATTGGCCCTTCACACTCCTTGCCACACACAAGGTCATATAAGTTACTATGTTACTGGCAAAGAGGATGAGCAACCGGCTGTTTTTACTGGAGATACATTGTTTATTGCTAGTTGTGGGAAATTTTTTGAAGGAACTGCAGAACAGATGTATCAGTCACTTAATGTAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGTTGATGAGGATGTATATCTAA
>Glyma14g36610.1 sequence type=predicted peptide gene model=Glyma14g36610 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MRIHHIACLQDNYSYLIVDESTKEAAAVDPVEPEKVLEVASSHGLTLKFVLTTHHHWDHAGGNDKIKQLVPGIKVYGGSIENVKGCTDKVENGDKVSLGAEITILALHTPCHTQGHISYYVTGKEDEQPAVFTGDTLFIASCGKFFEGTAEQMYQSLNVTLASLPKSTRVYCGHEYSVNNLQFALTLEPDNLRIQQKLTWARNQRQAGQATIPSTIEDELETNPFMRVDLPEIQERVGCKSPVEALGEIRKQKDNWRG* >Glyma14g36610.2 sequence type=predicted peptide gene model=Glyma14g36610 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MRIHHIACLQDNYSYLIVDESTKEAAAVDPVEPEKVLEVASSHGLTLKFVLTTHHHWDHAGGNDKIKQLVPGIKVYGGSIENVKGCTDKVENGDKVSLGAEITILALHTPCHTQGHISYYVTGKEDEQPAVFTGDTLFIASCGKFFEGTAEQMYQSLNVTLASLPKSTRVYCGHELMRMYI*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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