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Report for Sequence Feature Glyma14g35730
Feature Type: gene_model
Chromosome: Gm14
Start: 44791395
stop: 44795180
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma14g35730
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G01340 AT
Annotation by Michelle Graham. TAIR10: Mitochondrial substrate carrier family protein | chr5:143240-144561 REVERSE LENGTH=309
SoyBase E_val: 0 ISS
GO:0006810 GO-bp
Annotation by Michelle Graham. GO Biological Process: transport
SoyBase N/A ISS
GO:0006839 GO-bp
Annotation by Michelle Graham. GO Biological Process: mitochondrial transport
SoyBase N/A ISS
GO:0015744 GO-bp
Annotation by Michelle Graham. GO Biological Process: succinate transport
SoyBase N/A ISS
GO:0055085 GO-bp
Annotation by Michelle Graham. GO Biological Process: transmembrane transport
SoyBase N/A ISS
GO:0005739 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion
SoyBase N/A ISS
GO:0005743 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: mitochondrial inner membrane
SoyBase N/A ISS
GO:0005215 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transporter activity
SoyBase N/A ISS
GO:0015141 GO-mf
Annotation by Michelle Graham. GO Molecular Function: succinate transmembrane transporter activity
SoyBase N/A ISS
KOG0756
KOG
Mitochondrial tricarboxylate/dicarboxylate carrier proteins
JGI ISS
PTHR24089 Panther
FAMILY NOT NAMED
JGI ISS
PTHR24089:SF95 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF00153 PFAM
Mitochondrial carrier protein
JGI ISS
UniRef100_D7M735 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Mitochondrial substrate carrier family protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7M735_ARALL
SoyBase E_val: 0 ISS
UniRef100_UPI000233BF59 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233BF59 related cluster n=1 Tax=unknown RepID=UPI000233BF59
SoyBase E_val: 0 ISS
Expression Patterns of Glyma14g35730
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma14g35730
Paralog Evidence Comments
Glyma02g37460 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma14g35730 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.14g179300 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma14g35730
Transcripts of Glyma14g35730
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma14g35730.2 sequence type=transcript gene model=Glyma14g35730 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
TATTTTATCAGTGGTGAGAGAGAGAAGGCAACTCTCAACGAGACGCATTCATAAGTTAATTAAACATTTAGGGACATGTTCTAATACGTAAAACAAAGACAAAAACATAACTATAAAAAGTTCTGGGATTCAGCAGGGTCAAGCGAGGCAACGCAACGCAACGAGATTCTCCAAGCTCCGAATCCCTCGGCGACGCCGTCCACCACCTACTGTGATGTTGCACAAGATAACACCAACTCATATCCAAAGAAATCAATCCCACCCTACATGAAGGCTATCTCTGGCTCACTTGGAGGGATTATGGAGGCTTCTTGCCTGCAGCCCATTGATGTGATCAAGACCAGATTGCAGCTTGATAGGTCAGGGAATTACAAGGGAATACTGCATTGTGGTGCCACAATTTCACGAACAGAAGGGGTACGGGCTTTATGGAAAGGATTGACACCTTTTGCCACACATTTGACCTTGAAGTATTCACTTCGAATGGGTTCTAATGCTGTACTTCAATCAGCATTTAAGGACCCTGAGACTGGGAAGGTTAGCGGTCATGGGAGGTTCCTTTCTGGGTTTGGTGCTGGGGTGCTTGAGGCTGTTATTATTGTCACTCCATTTGAGGTGGTGAAGATAAGACTGCAGCAGCAGAGGGGTCTAAGCCCAGAGCTTTTGAAATATAAAGGTCCTGTTCACTGTGCTCGCATGATTATTAGGGAAGAAGGCTTCTGTGGTCTTTGGGCTGGAGTTGCTCCTACTGTGATGCGTAATGGGACAAATCAGTCTGCCATGTTTACTGCCAAAAATGCTTTCGATGTGCTTTTGTGGAAGAAAGATGAAGGGGATGGGAGAGTCCTCCAACCATGGCAATCTATGATTTCTGGATTCCTTGCAGGCACAGCAGGGCCTATTTGTACTGGTCCATTTGATGTAGTGAAAACAAGGTTGATGGCTCAGAGCCGAGAAGGTGGTGGTGTACTGAAATACAAGGGTATGATCCATGCCATTAGAACAATATATGCAGAAGAAGGACTTCTTGCCTTATGGAAAGGTCTGTTGCCTCGACTCATGAGGATCCCACCTGGACAGGCCATTATGTGGGGTGTAGCTGATCAAATAATTGGTTTGTATGAGAGGAGATATCTTCAACTTTCAACATTGTAACTTTTTTTCTTTGCATTATTTTTTGCTTCCAGTAGACATTAGTTCCATTACAAGGCTACAAAAATCATTATTTTAGCCTCTATCTATACAGTTTTTGTTTTAATTCCCTCAAATTTGTTGGGTGGACCATTAGGGGCCATACTTGCATTAGGGGACATTATTAGGGTCCGTACATTCATGTGGCCTAAACTACTAAAGAAGTATTCCCAATAGTTCAATAATGTAGAACTACTAGCAAGCTAGCTCTTTCGCATGTTGGTTTTTTGGTTATAGCTTGCATGTCACAAGCGATCTAAAATAATGTCAAAGGCTATTTTCTGGAAAGCAAACATTATTAGCGGCAATTACTTTTATAAGAAATTTGAATACTG
Coding sequences of Glyma14g35730
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma14g35730.1 sequence type=CDS gene model=Glyma14g35730 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAAACAGGATGTTGCACAAGATAACACCAACTCATATCCAAAGAAATCAATCCCACCCTACATGAAGGCTATCTCTGGCTCACTTGGAGGGATTATGGAGGCTTCTTGCCTGCAGCCCATTGATGTGATCAAGACCAGATTGCAGCTTGATAGGTCAGGGAATTACAAGGGAATACTGCATTGTGGTGCCACAATTTCACGAACAGAAGGGGTACGGGCTTTATGGAAAGGATTGACACCTTTTGCCACACATTTGACCTTGAAGTATTCACTTCGAATGGGTTCTAATGCTGTACTTCAATCAGCATTTAAGGACCCTGAGACTGGGAAGGTTAGCGGTCATGGGAGGTTCCTTTCTGGGTTTGGTGCTGGGGTGCTTGAGGCTGTTATTATTGTCACTCCATTTGAGGTGGTGAAGATAAGACTGCAGCAGCAGAGGGGTCTAAGCCCAGAGCTTTTGAAATATAAAGGTCCTGTTCACTGTGCTCGCATGATTATTAGGGAAGAAGGCTTCTGTGGTCTTTGGGCTGGAGTTGCTCCTACTGTGATGCGTAATGGGACAAATCAGTCTGCCATGTTTACTGCCAAAAATGCTTTCGATGTGCTTTTGTGGAAGAAAGATGAAGGGGATGGGAGAGTCCTCCAACCATGGCAATCTATGATTTCTGGATTCCTTGCAGGCACAGCAGGGCCTATTTGTACTGGTCCATTTGATGTAGTGAAAACAAGGTTGATGGCTCAGAGCCGAGAAGGTGGTGGTGTACTGAAATACAAGGGTATGATCCATGCCATTAGAACAATATATGCAGAAGAAGGACTTCTTGCCTTATGGAAAGGTCTGTTGCCTCGACTCATGAGGATCCCACCTGGACAGGCCATTATGTGGGGTGTAGCTGATCAAATAATTGGTTTGTATGAGAGGAGATATCTTCAACTTTCAACATTGTAA
>Glyma14g35730.2 sequence type=CDS gene model=Glyma14g35730 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAAGGCTATCTCTGGCTCACTTGGAGGGATTATGGAGGCTTCTTGCCTGCAGCCCATTGATGTGATCAAGACCAGATTGCAGCTTGATAGGTCAGGGAATTACAAGGGAATACTGCATTGTGGTGCCACAATTTCACGAACAGAAGGGGTACGGGCTTTATGGAAAGGATTGACACCTTTTGCCACACATTTGACCTTGAAGTATTCACTTCGAATGGGTTCTAATGCTGTACTTCAATCAGCATTTAAGGACCCTGAGACTGGGAAGGTTAGCGGTCATGGGAGGTTCCTTTCTGGGTTTGGTGCTGGGGTGCTTGAGGCTGTTATTATTGTCACTCCATTTGAGGTGGTGAAGATAAGACTGCAGCAGCAGAGGGGTCTAAGCCCAGAGCTTTTGAAATATAAAGGTCCTGTTCACTGTGCTCGCATGATTATTAGGGAAGAAGGCTTCTGTGGTCTTTGGGCTGGAGTTGCTCCTACTGTGATGCGTAATGGGACAAATCAGTCTGCCATGTTTACTGCCAAAAATGCTTTCGATGTGCTTTTGTGGAAGAAAGATGAAGGGGATGGGAGAGTCCTCCAACCATGGCAATCTATGATTTCTGGATTCCTTGCAGGCACAGCAGGGCCTATTTGTACTGGTCCATTTGATGTAGTGAAAACAAGGTTGATGGCTCAGAGCCGAGAAGGTGGTGGTGTACTGAAATACAAGGGTATGATCCATGCCATTAGAACAATATATGCAGAAGAAGGACTTCTTGCCTTATGGAAAGGTCTGTTGCCTCGACTCATGAGGATCCCACCTGGACAGGCCATTATGTGGGGTGTAGCTGATCAAATAATTGGTTTGTATGAGAGGAGATATCTTCAACTTTCAACATTGTAA
Predicted protein sequences of Glyma14g35730
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma14g35730.1 sequence type=predicted peptide gene model=Glyma14g35730 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MKQDVAQDNTNSYPKKSIPPYMKAISGSLGGIMEASCLQPIDVIKTRLQLDRSGNYKGILHCGATISRTEGVRALWKGLTPFATHLTLKYSLRMGSNAVLQSAFKDPETGKVSGHGRFLSGFGAGVLEAVIIVTPFEVVKIRLQQQRGLSPELLKYKGPVHCARMIIREEGFCGLWAGVAPTVMRNGTNQSAMFTAKNAFDVLLWKKDEGDGRVLQPWQSMISGFLAGTAGPICTGPFDVVKTRLMAQSREGGGVLKYKGMIHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAIMWGVADQIIGLYERRYLQLSTL*
>Glyma14g35730.2 sequence type=predicted peptide gene model=Glyma14g35730 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MKAISGSLGGIMEASCLQPIDVIKTRLQLDRSGNYKGILHCGATISRTEGVRALWKGLTPFATHLTLKYSLRMGSNAVLQSAFKDPETGKVSGHGRFLSGFGAGVLEAVIIVTPFEVVKIRLQQQRGLSPELLKYKGPVHCARMIIREEGFCGLWAGVAPTVMRNGTNQSAMFTAKNAFDVLLWKKDEGDGRVLQPWQSMISGFLAGTAGPICTGPFDVVKTRLMAQSREGGGVLKYKGMIHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAIMWGVADQIIGLYERRYLQLSTL*