Glyma14g35660 - SoyBase

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Report for Sequence Feature Glyma14g35660

Feature Type:	gene_model
Chromosome:	Gm14
Start:	44702997
stop:	44704634
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g35660

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G40080	AT	Annotation by Michelle Graham. TAIR10: ENTH/ANTH/VHS superfamily protein \| chr4:18579371-18580542 FORWARD LENGTH=365	SoyBase	E_val: 1.00E-52	ISS
GO:0008150	GO-bp	Annotation by Michelle Graham. GO Biological Process: biological process	SoyBase	N/A	ISS
GO:0010167	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to nitrate	SoyBase	N/A	ISS
GO:0015706	GO-bp	Annotation by Michelle Graham. GO Biological Process: nitrate transport	SoyBase	N/A	ISS
GO:0005739	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion	SoyBase	N/A	ISS
GO:0005543	GO-mf	Annotation by Michelle Graham. GO Molecular Function: phospholipid binding	SoyBase	N/A	ISS
PTHR22951	Panther	CLATHRIN ASSEMBLY PROTEIN	JGI		ISS
PTHR22951:SF8	Panther	EPSIN N-TERMINAL HOMOLOGY (ENTH) DOMAIN-CONTAINING	JGI		ISS
PF07651	PFAM	ANTH domain	JGI		ISS
UniRef100_B9RJR9	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Clathrin assembly protein, putative n=1 Tax=Ricinus communis RepID=B9RJR9_RICCO	SoyBase	E_val: 6.00E-85	ISS
UniRef100_I1MAX6	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MAX6_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma14g35660

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g35660 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g178700	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma14g35660

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma14g35660

Limit To All Plant Sequences

>Glyma14g35660.1   sequence type=CDS   gene model=Glyma14g35660   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTCCCTCCGCAAGAGGCTGAGAAATCTTGGGCACAATCTCAAGGACAAAGCCTCGGTGATCGCAGCATCACTCTCTCTCAAGCGCCACGTGTCCTCCGTCCGCATCCATGTCCTCCACGCCACCACCCACCGCCTCTCTGCTCCGCCATCCACGTCGCAAATCGCCGCCGTTCTCTCCGCCGGAAAAGGCTCCTATCTCCTGTCACGCACCTGCATAGACACCATCATGGACCGCCTCCACAGAACCCGAAGCGCCACGGTGGCACTCAAATGCCTCTTCACTCTTCACAACATCGTATCCGAGAGAAAGGGACCCTTAACGTTGAAGGACAACCTCTCCCACTACCCTTCGAACGGAGGACGCAACGCCCTTAACGTTTCCACCTTCCGCGACGACACGGACGTTGAAACCATGGAGCTCAGCGCGTGGGTTCGATGGTACGCTAATGTTCTCGAACATGTCTTAACCGTTTCGCGCGTTTTAGGTTATTATCTAATAAACTCGAATGACGGCACCAGAGAGGTTTTTTCGAGTGTCGAGTTGTTTCGTGAAATACGAGGTCTCGTGGATTTTGTTGAGCAAGTGAGCCACGCGCCTGAGTCGCTGCATCTCCAAAAAATTGAGTTGGTGTTCAACGTTGTGAGATTGGTGTGTGAGGATTACGGGCGCGTGCAACGCGAGATTTTGCGGCGCGTGGAGGAGGGTGGAAATAGGGTGGAGGATTTGGATGTTGGAGAGTTGAGGGAATTTGTGAGGTGTATGAAGAGATTGGAGGGGTGTAGGGAGAAATTGGTGGTTTTGTTTGTGAATAGGAAGCGAAACGATGCGTTTTGGGATTTGATTGGAAAGGTTAAGTATAAGGGGGTGGAGGTGATGGAGGAGATGGAGGGGAAGTGGTTGATGGTAGTGAAAAAGGGCATGAACGAGTTGGCTGAGTCGACTCGGTTCACTAACCCATTTCTTGAGCCTGGGGAGTTTATGTATTCCGGTCCCACCGGGTGGCGCGTGGCCACGTGTCAACCTGTTCCAACGGTGGGATGA

Predicted protein sequences of Glyma14g35660

Limit To All Plant Sequences

>Glyma14g35660.1   sequence type=predicted peptide   gene model=Glyma14g35660   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSLRKRLRNLGHNLKDKASVIAASLSLKRHVSSVRIHVLHATTHRLSAPPSTSQIAAVLSAGKGSYLLSRTCIDTIMDRLHRTRSATVALKCLFTLHNIVSERKGPLTLKDNLSHYPSNGGRNALNVSTFRDDTDVETMELSAWVRWYANVLEHVLTVSRVLGYYLINSNDGTREVFSSVELFREIRGLVDFVEQVSHAPESLHLQKIELVFNVVRLVCEDYGRVQREILRRVEEGGNRVEDLDVGELREFVRCMKRLEGCREKLVVLFVNRKRNDAFWDLIGKVKYKGVEVMEEMEGKWLMVVKKGMNELAESTRFTNPFLEPGEFMYSGPTGWRVATCQPVPTVG*

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