SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT4G40080 | AT | Annotation by Michelle Graham. TAIR10: ENTH/ANTH/VHS superfamily protein | chr4:18579371-18580542 FORWARD LENGTH=365 | SoyBase | E_val: 1.00E-52 | ISS |
| GO:0008150 | GO-bp | Annotation by Michelle Graham. GO Biological Process: biological process | SoyBase | N/A | ISS |
| GO:0010167 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to nitrate | SoyBase | N/A | ISS |
| GO:0015706 | GO-bp | Annotation by Michelle Graham. GO Biological Process: nitrate transport | SoyBase | N/A | ISS |
| GO:0005739 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion | SoyBase | N/A | ISS |
| GO:0005543 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: phospholipid binding | SoyBase | N/A | ISS |
| PTHR22951 | Panther | CLATHRIN ASSEMBLY PROTEIN | JGI | ISS | |
| PTHR22951:SF8 | Panther | EPSIN N-TERMINAL HOMOLOGY (ENTH) DOMAIN-CONTAINING | JGI | ISS | |
| PF07651 | PFAM | ANTH domain | JGI | ISS | |
| UniRef100_B9RJR9 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Clathrin assembly protein, putative n=1 Tax=Ricinus communis RepID=B9RJR9_RICCO | SoyBase | E_val: 6.00E-85 | ISS |
| UniRef100_I1MAX6 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MAX6_SOYBN | SoyBase | E_val: 0 | ISS |
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Glyma14g35660 not represented in the dataset |
Glyma14g35660 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.14g178700 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma14g35660.1 sequence type=CDS gene model=Glyma14g35660 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTCCCTCCGCAAGAGGCTGAGAAATCTTGGGCACAATCTCAAGGACAAAGCCTCGGTGATCGCAGCATCACTCTCTCTCAAGCGCCACGTGTCCTCCGTCCGCATCCATGTCCTCCACGCCACCACCCACCGCCTCTCTGCTCCGCCATCCACGTCGCAAATCGCCGCCGTTCTCTCCGCCGGAAAAGGCTCCTATCTCCTGTCACGCACCTGCATAGACACCATCATGGACCGCCTCCACAGAACCCGAAGCGCCACGGTGGCACTCAAATGCCTCTTCACTCTTCACAACATCGTATCCGAGAGAAAGGGACCCTTAACGTTGAAGGACAACCTCTCCCACTACCCTTCGAACGGAGGACGCAACGCCCTTAACGTTTCCACCTTCCGCGACGACACGGACGTTGAAACCATGGAGCTCAGCGCGTGGGTTCGATGGTACGCTAATGTTCTCGAACATGTCTTAACCGTTTCGCGCGTTTTAGGTTATTATCTAATAAACTCGAATGACGGCACCAGAGAGGTTTTTTCGAGTGTCGAGTTGTTTCGTGAAATACGAGGTCTCGTGGATTTTGTTGAGCAAGTGAGCCACGCGCCTGAGTCGCTGCATCTCCAAAAAATTGAGTTGGTGTTCAACGTTGTGAGATTGGTGTGTGAGGATTACGGGCGCGTGCAACGCGAGATTTTGCGGCGCGTGGAGGAGGGTGGAAATAGGGTGGAGGATTTGGATGTTGGAGAGTTGAGGGAATTTGTGAGGTGTATGAAGAGATTGGAGGGGTGTAGGGAGAAATTGGTGGTTTTGTTTGTGAATAGGAAGCGAAACGATGCGTTTTGGGATTTGATTGGAAAGGTTAAGTATAAGGGGGTGGAGGTGATGGAGGAGATGGAGGGGAAGTGGTTGATGGTAGTGAAAAAGGGCATGAACGAGTTGGCTGAGTCGACTCGGTTCACTAACCCATTTCTTGAGCCTGGGGAGTTTATGTATTCCGGTCCCACCGGGTGGCGCGTGGCCACGTGTCAACCTGTTCCAACGGTGGGATGA
>Glyma14g35660.1 sequence type=predicted peptide gene model=Glyma14g35660 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MSLRKRLRNLGHNLKDKASVIAASLSLKRHVSSVRIHVLHATTHRLSAPPSTSQIAAVLSAGKGSYLLSRTCIDTIMDRLHRTRSATVALKCLFTLHNIVSERKGPLTLKDNLSHYPSNGGRNALNVSTFRDDTDVETMELSAWVRWYANVLEHVLTVSRVLGYYLINSNDGTREVFSSVELFREIRGLVDFVEQVSHAPESLHLQKIELVFNVVRLVCEDYGRVQREILRRVEEGGNRVEDLDVGELREFVRCMKRLEGCREKLVVLFVNRKRNDAFWDLIGKVKYKGVEVMEEMEGKWLMVVKKGMNELAESTRFTNPFLEPGEFMYSGPTGWRVATCQPVPTVG*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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