Glyma14g35510 - SoyBase

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Report for Sequence Feature Glyma14g35510

Feature Type:	gene_model
Chromosome:	Gm14
Start:	44464474
stop:	44465408
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g35510

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
UniRef100_I1MAW7	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MAW7_SOYBN	SoyBase	E_val: 5.00E-136	ISS
UniRef100_Q9SK89	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: F12K8.18 protein n=2 Tax=Arabidopsis thaliana RepID=Q9SK89_ARATH	SoyBase	E_val: 7.00E-06	ISS

Expression Patterns of Glyma14g35510

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma14g35510

Paralog	Evidence	Comments
Glyma02g37180	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma14g35510 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g177400	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma14g35510

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma14g35510

Limit To All Plant Sequences

>Glyma14g35510.1   sequence type=CDS   gene model=Glyma14g35510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAAACCCTACGAAGACATTTCTCAAAGAAAAAAAAGGACACATATTGTGTTATTGGCCGGGTCAAGCACAATGGCTATTGCAAGAAGCACCCCAAACACCACCAATCACCCGGTGTGTGTTCTCTTTGTTTAAGGGAAAAGCTTTCTCAACTATCTTCTTCTTCTTCTGACTCACATAGAAGAATCTCATCTATTTGTTCTTCTAGTTCTTCTTCTTTGTCATCATCATCTTGTTACTCCTCAGCTTCAGCCTCTTCTTCATGTGCTTCTCCAATGCAATGTTTCTGTTTCACTACTACCGAGGGGAAGAGTAGTTCTTCTTCGGTCTCGATTTTCCTGCTGAGTGGTAACGATGGAATCATAAAGGGTAGGTGTAGGCCATTGGATATTGTTCCAAGAAGAAGAGATTGTGAAGGTGGTGGTTTTGATCATCATGGTCATGATAAGAGTGCCAACAAAAGTGGATTTTGGTTCAAGTTGCTTCATCCTAAAAGCAAGAGAATGAAGGAATGTTATAGGGAGGACAATAAGCAGCTTGTTCGTGCTATGTCTATAGAAATAAGAGAAACAATGGCTTAA

Predicted protein sequences of Glyma14g35510

Limit To All Plant Sequences

>Glyma14g35510.1   sequence type=predicted peptide   gene model=Glyma14g35510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
METLRRHFSKKKKDTYCVIGRVKHNGYCKKHPKHHQSPGVCSLCLREKLSQLSSSSSDSHRRISSICSSSSSSLSSSSCYSSASASSSCASPMQCFCFTTTEGKSSSSSVSIFLLSGNDGIIKGRCRPLDIVPRRRDCEGGGFDHHGHDKSANKSGFWFKLLHPKSKRMKECYREDNKQLVRAMSIEIRETMA*

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