Report for Sequence Feature Glyma14g35395
Feature Type: gene_model
Chromosome: Gm14
Start: 44344995
stop: 44347220
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma14g35395
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G42670 AT
Annotation by Michelle Graham. TAIR10: Protein of unknown function (DUF1637) | chr2:17772004-17773700 REVERSE LENGTH=242
SoyBase E_val: 6.00E-53 ISS
GO:0055114 GO-bp
Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0047800 GO-mf
Annotation by Michelle Graham. GO Molecular Function: cysteamine dioxygenase activity
SoyBase N/A ISS
KOG4281
KOG
Uncharacterized conserved protein
JGI ISS
PTHR22966 Panther
UNCHARACTERIZED
JGI ISS
PF07847 PFAM
Protein of unknown function (DUF1637)
JGI ISS
UniRef100_G7KAG2 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: 2-aminoethanethiol dioxygenase n=1 Tax=Medicago truncatula RepID=G7KAG2_MEDTR
SoyBase E_val: 3.00E-132 ISS
UniRef100_UPI000233BDEC UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233BDEC related cluster n=1 Tax=unknown RepID=UPI000233BDEC
SoyBase E_val: 2.00E-174 ISS
Expression Patterns of Glyma14g35395
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma14g35395
Paralog Evidence Comments
Glyma02g37100 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma14g35395 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.14g176800 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma14g35395
Transcripts of Glyma14g35395
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma14g35395.2 sequence type=transcript gene model=Glyma14g35395 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
TTTGTCTTCATCATTTTCTTGATTCCTAAGTCCTAACCACTACAGTTATTATTAGCTTGCATGTATAGTATGCAAATAAATTTAAGGACCAATTCATATGTTTGAGTTAAATTTTGCAGACAAAATTGAAGCTATGGACGTAGGAATCGACGAGTTCGGGTTGTGTGATTCTCCAACATCAGACGCAACCGTTGATAGCAGCAACAGCAAGGGTTTGCTTGGTGGACAAGGATTCTCTGAGATCACATACATTCACATTCATGAATGTGACTATTTCTCAATGGGTGTGTTCTGTATTCCAGCAGGAAAAGTGTTTCCACTTCATGATCACCCGGGAATGACAGTGTTGAGTAAGCTCTTGTATGGCTCTGCCTATGTCAAAGCTTATGACTGGATCGCATTGGATTGTGCTGGAAGCCAAACAATAGGATTGGCTGGGAGGGTAGTGGATGAAGTATTCAAAGCACCACATGAGCCATCCATATTATTTCCAAGAAGTGGTGGCAACATTCATTCTTTCACAGCGTTGACGCCATGTGCAATACTAGACGTGCTATCTCCACCATACTCTGAAGAGTTTGGAAGGCCTTCCACTTACTTCTCAGATATCCCTATCCCTTCTCTTAATGGTTATGCCATACTTGAAGAGAAACCAATGCCTAGTGATCTAGTTGTTCAAGGAGCACCATACCTTGGACCTTCAATTGTAACCGTGGACGATTATGTGGGTGTTTGAGTTGTCGTTGGGGTCCTCAAAATCGGGGGGAGATATCTTTTGCAAACGGTCGTTAGATCTGTATGAAGACATGTGCTGCCACATAATGAACGACAATTCAAACATAGCCGGCAACTTCGATCAAATCAATCAATTTTGATAATCATGTGTAAATGTGTAAATTGAGTGTTTGTGTGTACATAAGTTCTTATATCTAAATGTAAATATTTTTTTTAAACCACCTTATTTTTATGAGTTGGTTATGAAACTAATTTTAAATTTTAAATTTAGTTTTAATTAAAA
Coding sequences of Glyma14g35395
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma14g35395.1 sequence type=CDS gene model=Glyma14g35395 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAAAGAAGCAAAATACAAGTGCTTTATGATGCTAGCCATGCCGTGTTTTCTCAAGAGGGGCTTCCAACTTTTCAACAAATCCATTATGTCAAAAATTTGTTAGACAAAATTGAAGCTATGGACGTAGGAATCGACGAGTTCGGGTTGTGTGATTCTCCAACATCAGACGCAACCGTTGATAGCAGCAACAGCAAGGGTTTGCTTGGTGGACAAGGATTCTCTGAGATCACATACATTCACATTCATGAATGTGACTATTTCTCAATGGGTGTGTTCTGTATTCCAGCAGGAAAAGTGTTTCCACTTCATGATCACCCGGGAATGACAGTGTTGAGTAAGCTCTTGTATGGCTCTGCCTATGTCAAAGCTTATGACTGGATCGCATTGGATTGTGCTGGAAGCCAAACAATAGGATTGGCTGGGAGGGTAGTGGATGAAGTATTCAAAGCACCACATGAGCCATCCATATTATTTCCAAGAAGTGGTGGCAACATTCATTCTTTCACAGCGTTGACGCCATGTGCAATACTAGACGTGCTATCTCCACCATACTCTGAAGAGTTTGGAAGGCCTTCCACTTACTTCTCAGATATCCCTATCCCTTCTCTTAATGGTTATGCCATACTTGAAGAGAAACCAATGCCTAGTGATCTAGTTGTTCAAGGAGCACCATACCTTGGACCTTCAATTGTAACCGTGGACGATTATGTGGGTGTTTGA
>Glyma14g35395.2 sequence type=CDS gene model=Glyma14g35395 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGTTTGAGTTAAATTTTGCAGACAAAATTGAAGCTATGGACGTAGGAATCGACGAGTTCGGGTTGTGTGATTCTCCAACATCAGACGCAACCGTTGATAGCAGCAACAGCAAGGGTTTGCTTGGTGGACAAGGATTCTCTGAGATCACATACATTCACATTCATGAATGTGACTATTTCTCAATGGGTGTGTTCTGTATTCCAGCAGGAAAAGTGTTTCCACTTCATGATCACCCGGGAATGACAGTGTTGAGTAAGCTCTTGTATGGCTCTGCCTATGTCAAAGCTTATGACTGGATCGCATTGGATTGTGCTGGAAGCCAAACAATAGGATTGGCTGGGAGGGTAGTGGATGAAGTATTCAAAGCACCACATGAGCCATCCATATTATTTCCAAGAAGTGGTGGCAACATTCATTCTTTCACAGCGTTGACGCCATGTGCAATACTAGACGTGCTATCTCCACCATACTCTGAAGAGTTTGGAAGGCCTTCCACTTACTTCTCAGATATCCCTATCCCTTCTCTTAATGGTTATGCCATACTTGAAGAGAAACCAATGCCTAGTGATCTAGTTGTTCAAGGAGCACCATACCTTGGACCTTCAATTGTAACCGTGGACGATTATGTGGGTGTTTGA
Predicted protein sequences of Glyma14g35395
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma14g35395.1 sequence type=predicted peptide gene model=Glyma14g35395 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MERSKIQVLYDASHAVFSQEGLPTFQQIHYVKNLLDKIEAMDVGIDEFGLCDSPTSDATVDSSNSKGLLGGQGFSEITYIHIHECDYFSMGVFCIPAGKVFPLHDHPGMTVLSKLLYGSAYVKAYDWIALDCAGSQTIGLAGRVVDEVFKAPHEPSILFPRSGGNIHSFTALTPCAILDVLSPPYSEEFGRPSTYFSDIPIPSLNGYAILEEKPMPSDLVVQGAPYLGPSIVTVDDYVGV*
>Glyma14g35395.2 sequence type=predicted peptide gene model=Glyma14g35395 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MFELNFADKIEAMDVGIDEFGLCDSPTSDATVDSSNSKGLLGGQGFSEITYIHIHECDYFSMGVFCIPAGKVFPLHDHPGMTVLSKLLYGSAYVKAYDWIALDCAGSQTIGLAGRVVDEVFKAPHEPSILFPRSGGNIHSFTALTPCAILDVLSPPYSEEFGRPSTYFSDIPIPSLNGYAILEEKPMPSDLVVQGAPYLGPSIVTVDDYVGV*