|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT2G21870 | AT | Annotation by Michelle Graham. TAIR10: copper ion binding;cobalt ion binding;zinc ion binding | chr2:9320612-9322618 REVERSE LENGTH=220 | SoyBase | E_val: 1.00E-103 | ISS |
GO:0006511 | GO-bp | Annotation by Michelle Graham. GO Biological Process: ubiquitin-dependent protein catabolic process | SoyBase | N/A | ISS |
GO:0009555 | GO-bp | Annotation by Michelle Graham. GO Biological Process: pollen development | SoyBase | N/A | ISS |
GO:0009853 | GO-bp | Annotation by Michelle Graham. GO Biological Process: photorespiration | SoyBase | N/A | ISS |
GO:0051788 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to misfolded protein | SoyBase | N/A | ISS |
GO:0080129 | GO-bp | Annotation by Michelle Graham. GO Biological Process: proteasome core complex assembly | SoyBase | N/A | ISS |
GO:0005730 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleolus | SoyBase | N/A | ISS |
GO:0005739 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion | SoyBase | N/A | ISS |
GO:0005753 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: mitochondrial proton-transporting ATP synthase complex | SoyBase | N/A | ISS |
GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
GO:0016020 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: membrane | SoyBase | N/A | ISS |
GO:0005507 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: copper ion binding | SoyBase | N/A | ISS |
GO:0008270 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: zinc ion binding | SoyBase | N/A | ISS |
GO:0050897 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: cobalt ion binding | SoyBase | N/A | ISS |
UniRef100_I1MAU1 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MAU1_SOYBN | SoyBase | E_val: 7.00E-144 | ISS |
UniRef100_Q9SJ12 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Probable ATP synthase 24 kDa subunit, mitochondrial n=2 Tax=Arabidopsis thaliana RepID=ATP7_ARATH | SoyBase | E_val: 2.00E-100 | ISS |
Glyma14g34990 not represented in the dataset |
Glyma14g34990 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma14g34990.1 sequence type=CDS gene model=Glyma14g34990 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTCTTGTGGTTTATCCACTTTTTTTTTGTCATGTGCTCATTTTTCTTCATTTTTCTTACAGATCTATGGCAGTCAAATACTTCTACAAAAGGAGCATGCTATTCCAGTTCGTCACTTTGCTAAAGAGTCTGCCCCTCCTGCCCTTAAGGGAGACGAGATGCTGAAGAACATTTTTGTGGAGGTGAAGAACAAATTTGAGACCGCCATAGGAATATTAAAGAAGGAGAAAATCACCATTGACCCAGAAGATCCAGCTGTTGTTTCTCATTATGCAAAGGTCATGAAAACAATTAGAGAGAAGGCAAGCTTATTGCCGGAGTCCCAAGACATACTATCCACCATTGAAATTGAGACACAGGATATTCCAGATGCTCGGACCTATCTTCTGACTTTGAAGGAAATAAGAGTCAAGAGAGGTCTTACAGATGATCTTGGTGCAGAGGCTCTGATGATAGATGCATTGGACAAAGTTGAAAAGGATTTAAAAAAACCTTTACTGAGAAATGATAAGAAAGGAATGGACCTTCTCTTGGCAGAGTTTGATAAGATTAATAAGAAACTTGGAATTCGAAAGGAAGATCTACCGAAGTATGAAGAGGAGCTAGAACTTAAAGTAGCCAAAGCACAACTGGAGGAGCTGAAGAAGGATGCTCTTGAGGCAATGGAAACTCAAAAGAAGAGGTACTACTAA
>Glyma14g34990.1 sequence type=predicted peptide gene model=Glyma14g34990 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MSCGLSTFFLSCAHFSSFFLQIYGSQILLQKEHAIPVRHFAKESAPPALKGDEMLKNIFVEVKNKFETAIGILKKEKITIDPEDPAVVSHYAKVMKTIREKASLLPESQDILSTIEIETQDIPDARTYLLTLKEIRVKRGLTDDLGAEALMIDALDKVEKDLKKPLLRNDKKGMDLLLAEFDKINKKLGIRKEDLPKYEEELELKVAKAQLEELKKDALEAMETQKKRYY*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||