|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT1G18800 | AT | Annotation by Michelle Graham. TAIR10: NAP1-related protein 2 | chr1:6481466-6483463 REVERSE LENGTH=256 | SoyBase | E_val: 2.00E-37 | ISS |
GO:0006334 | GO-bp | Annotation by Michelle Graham. GO Biological Process: nucleosome assembly | SoyBase | N/A | ISS |
GO:0008283 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cell proliferation | SoyBase | N/A | ISS |
GO:0010311 | GO-bp | Annotation by Michelle Graham. GO Biological Process: lateral root formation | SoyBase | N/A | ISS |
GO:0030154 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cell differentiation | SoyBase | N/A | ISS |
GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
GO:0003677 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: DNA binding | SoyBase | N/A | ISS |
GO:0003682 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: chromatin binding | SoyBase | N/A | ISS |
GO:0042393 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: histone binding | SoyBase | N/A | ISS |
PTHR11875 | Panther | NUCLEOSOME ASSEMBLY PROTEIN | JGI | ISS | |
PTHR11875:SF47 | Panther | JGI | ISS | ||
PF00956 | PFAM | Nucleosome assembly protein (NAP) | JGI | ISS | |
UniRef100_B9IJV5 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Nucleosome/chromatin assembly factor group (Fragment) n=1 Tax=Populus trichocarpa RepID=B9IJV5_POPTR | SoyBase | E_val: 5.00E-35 | ISS |
UniRef100_UPI00023395C3 | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI00023395C3 related cluster n=1 Tax=unknown RepID=UPI00023395C3 | SoyBase | E_val: 7.00E-43 | ISS |
Glyma14g34961 not represented in the dataset |
Glyma14g34961 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.14g173800 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma14g34961.1 sequence type=CDS gene model=Glyma14g34961 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGCCAAGAAGGGCGAAAAAACTTGATGAAGTCGACGGAGAACTCGTCCTCTCTATTGAAAAGTTGCAGGAGATCCAAGATGAGCTTGAAAAGATCAATGAGAAAACCAATGACAAAGTGCTCGAAATAGGGCAGAAGTACAATGAGATACGGAAGCCCGTCTATGATAAGAGGAATGATATTATCAAGGCTATCTCCGAATTTTGGTTAACTGCTTTTTTGAGCCATCCTGCTCTTGGTGATCTTTTGAACGAGGAAGATTAG
>Glyma14g34961.1 sequence type=predicted peptide gene model=Glyma14g34961 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MPRRAKKLDEVDGELVLSIEKLQEIQDELEKINEKTNDKVLEIGQKYNEIRKPVYDKRNDIIKAISEFWLTAFLSHPALGDLLNEED*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||