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Report for Sequence Feature Glyma14g34640

Feature Type:gene_model
Chromosome:Gm14
Start:43296944
stop:43300652
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G65160AT Annotation by Michelle Graham. TAIR10: tetratricopeptide repeat (TPR)-containing protein | chr5:26031457-26033668 REVERSE LENGTH=593 SoyBaseE_val: 3.00E-132ISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
KOG0624 KOG dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains JGI ISS
PTHR22904Panther CHAPERONE BINDING PROTEIN JGI ISS
PF00085PFAM Thioredoxin JGI ISS
PF00515PFAM Tetratricopeptide repeat JGI ISS
UniRef100_G7KAB8UniRef Annotation by Michelle Graham. Most informative UniRef hit: Small glutamine-rich tetratricopeptide repeat-containing protein n=1 Tax=Medicago truncatula RepID=G7KAB8_MEDTR SoyBaseE_val: 0ISS
UniRef100_I1MAS5UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MAS5_SOYBN SoyBaseE_val: 0ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g34640 not represented in the dataset

Glyma14g34640 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

ParalogEvidenceComments
Glyma13g01900 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Corresponding NameAnnotation VersionEvidenceComments
Glyma.14g171800 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma14g34640.2   sequence type=transcript   gene model=Glyma14g34640   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TTTCATAATAAAGTGCTTTGTATTGAAGCCATCACTTTAAGACTTCCCTTTCATAATCTCTCAGATATCTTTCTGCCTTCTGTGCCTTATTCTTTGGTTCATTTTGTTTAGTTTTTCCCTCCATCTAAACAACACACACAGTTGTTTCTGTGACACGTCACATAGCTATTTCAACAAGCCATGGAAATGAAGGCAAAGAACAACAAGAAGGTAGGGAGTGAATTGGGTTGTGGTCTCATGGGGAGAATTCTCCACCTCAAAAGCCATAAGATGAGAAAAGCATCTGTTCATTCCCTACCCTTTAAGAATGCACAGAGTGATGATGATGTCAAAAGTGAAGAATCAAAGGTTTCAAGAAAAAGATCCACTGGCACTGAGCCACCACACAAACCGAGTGGTGTAGAACAAAAACCTGCCAGAAAAAGTGCCTCTATTCACCAACAACCTTGTACAAATCGAAACAACCAACATCAGAGGCATTCAGATGTTGCTGCAAGAAGCTCAACATCATCGTCCTCTAGTACCTCAATTTCAACTAAGGTTGTTCAACAAAACAAGGACAAAAGTCATGAGAGAAAACCACAAGGACAGCCCACTGGAAATTCTCTTGTGCTTGCTAGGATAAGTACTAGCAATGAGAATAATGAGAACAACAAGTCTCAATTGAAACTCACTGGGAATTTGCTTGTGAATAACACCCCAAGAAGGAAGAGTGTGGAATACATGCCTAAGAGTGCAGAGTTGAACTCTGTGCCCAGTTCTTACACCAATGCAAGCAAAGGCTTGATGGGGAATATCTTGAATAGGAACAGCGATGGCAATAAGGTTGCACAGTTTTTGAGTCCAAGGATGAAAAAAGTGGACCCTGAGGTGTCGAAATCCATGGGAAATGATGCATACAAGCAGGGAAGATTTGAAGAGGCCTTGGCTCTGTATGATCGAGCAATTGCACTTGATTCAAATAAGGCAATATATCATTGCAACAAAAGTGCAGCTTTAATTGGCTTAGGAAGGCTTCAGGAAGCAATTGTTGAGTGTGAGGAATCAATCAAGCTGGACCCTTCATATGTCAGAGCCCACAACCGTTTGGCCACAATATATTTCAGGTTGGGAGAAGCAGAAAAAGCACTGAATTGCAATCAGATAACCCCATATGTTGATTCAATACTTACTTTCCAAGCTCAGGCTCTTCAAAATCACCTTAAAAAATGCATAGAAGCACGGAAAGTCAATGCATGGAGTGATATACTAAAGGAAACACAGTCTGCAATATCCTTAGGTTCTGATTCAGCTCCACAGGTCTACGCTTTACAAATTGAAGCCTTGCTGAAGCTCTTAAGATATCAAGAGGCCTATACCATCTACAATAAAATGCCAAAATTTTCAATTGATTGGTGTACCAAGATATTTGGCCCAGCTTGTAGCGCTTACCTATTGATGATAGGCTCAATGATTTACTTGGCATCTGGCAGGTTTGAGGAAGCTGTGACAGCAGCTCAGCAAGCAGTTAAAGTTGATCCAGGCAATAGAGAGCTGAATGCAATGGTAAAGAAGGCCAGAGCAGCAACATCAGCTAGAATGAGCGGAAACTTGCTCTTCAAGGCTTCGAAATTCATCGAAGCATGTGCCGTGTACAACGAAGGACTAGAGCATGATCCACACAACTCAGTTCTACTATGCAACAGAGCTGCATGTCGTTCCAAACTTGGTCAAAATGAGAAAGCAATTGAAGATTGTAACGCGGCACTTATGGTTCAGCCAAGTTATAGCAAAGCAAAGTTAAGGAGGGCAAATTGCAATGCCAAGTTGGAACGGTGGGAAGCTGCTATTCAAGACTATGAAATGCTATTAAGAGAAAGGCCAGGGGATGAGGAAGTGGCAAGGGCTTTGTTTGAAGCTCAGCTCCAACTCAAGATGCTGCGTGGTGAAGATATTAAGGACTTGAAATTTGGTTCAAACTTGGTTTCCATCTCAAGTAATGATCGGTTCAGACATTATGTAACCTCACCTGGTAAGACACATTTGGCTGCTTCTGTTGTATAATTGCATTAATATGAGTACCACAAATACACTAACACTTGTGAGTGTTAATTCAATAGGTATGGCTGTGGCGCTTTTTACCAACAAGGCAACCCACAAGAAAGTGTTGCTTGTGTTGGAGCAAATCAGCAAGAGATTCCCATCAGTTAATTTCCTCAAGGTTGGTTTATTTTATGTTGTTTAGAATTCATAGCTTGTGGGGATGTTAACTGAAAAGTAGTTAGAAAATAGAATCTTCAACTCTCTATGGGGACAGTTATTACCAAATGCAACATATAATGTGATTAAGAAAATCAACGTTGACCAGTATTAATTCTTTAAATTTGTTTGTGTCTTTTTCGATGTTTCTCTCTTGAAACTTAAATATTTAATGATAATGTTTTAGGTGGAAATCGAAGACCACCCCTACTTAGCAAAGTCAGAAAGTGTGAGCTCTATCCCAGCCTTCAAGATATACAAGAACGGATCAAGCGTTAAAGAAATTTCAGGAAACAACCACGAGTTGTTAGAAAGATCAGTTAAATTGTATAGCAGCTGAGATCATTGCACTTGAATAACCTCCTCAAATTGTTTCTCCTTCATAAATTAGTTGATCTTGCTTACAGGGCAAGAGGATGAGCATTGTACCACTGTAGCATGTAAAAAATGTTCATAGAAAAATATTCTGTGTTAGTAATAGATTCTTTTAATCTATTGAATGTTCCTTCAATTATTCCTATGCCATAACCTAAACAATTGCATTGTATTTTTCTTTTTTTAAATATTACATGTTCATAACAAGAATGTTTTCTCAGAGTTTGTCCTTGTGAATTACTGGTTGTAAAATGATAAAAGTAACATAACTGCGTGCGTTGGAGAAACTTTGTGGAATATCAGTGGACTTATGTTCTACG

>Glyma14g34640.1   sequence type=CDS   gene model=Glyma14g34640   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAAATGAAGGCAAAGAACAACAAGAAGGTAGGGAGTGAATTGGGTTGTGGTCTCATGGGGAGAATTCTCCACCTCAAAAGCCATAAGATGAGAAAAGCATCTGTTCATTCCCTACCCTTTAAGAATGCACAGAGTGATGATGATGTCAAAAGTGAAGAATCAAAGGTTTCAAGAAAAAGATCCACTGGCACTGAGCCACCACACAAACCGAGTGGTGTAGAACAAAAACCTGCCAGAAAAAGTGCCTCTATTCACCAACAACCTTGTACAAATCGAAACAACCAACATCAGAGGCATTCAGATGTTGCTGCAAGAAGCTCAACATCATCGTCCTCTAGTACCTCAATTTCAACTAAGGTTGTTCAACAAAACAAGGACAAAAGTCATGAGAGAAAACCACAAGGACAGCCCACTGGAAATTCTCTTGTGCTTGCTAGGATAAGTACTAGCAATGAGAATAATGAGAACAACAAGTCTCAATTGAAACTCACTGGGAATTTGCTTGTGAATAACACCCCAAGAAGGAAGAGTGTGGAATACATGCCTAAGAGTGCAGAGTTGAACTCTGTGCCCAGTTCTTACACCAATGCAAGCAAAGGCTTGATGGGGAATATCTTGAATAGGAACAGCGATGGCAATAAGGTTGCACAGTTTTTGAGTCCAAGGATGAAAAAAGTGGACCCTGAGGTGTCGAAATCCATGGGAAATGATGCATACAAGCAGGGAAGATTTGAAGAGGCCTTGGCTCTGTATGATCGAGCAATTGCACTTGATTCAAATAAGGCAATATATCATTGCAACAAAAGTGCAGCTTTAATTGGCTTAGGAAGGCTTCAGGAAGCAATTGTTGAGTGTGAGGAATCAATCAAGCTGGACCCTTCATATGTCAGAGCCCACAACCGTTTGGCCACAATATATTTCAGGTTGGGAGAAGCAGAAAAAGCACTGAATTGCAATCAGATAACCCCATATGTTGATTCAATACTTACTTTCCAAGCTCAGGCTCTTCAAAATCACCTTAAAAAATGCATAGAAGCACGGAAAGTCAATGCATGGAGTGATATACTAAAGGAAACACAGTCTGCAATATCCTTAGGTTCTGATTCAGCTCCACAGGTCTACGCTTTACAAATTGAAGCCTTGCTGAAGCTCTTAAGATATCAAGAGGCCTATACCATCTACAATAAAATGCCAAAATTTTCAATTGATTGGTGTACCAAGATATTTGGCCCAGCTTGTAGCGCTTACCTATTGATGATAGGCTCAATGATTTACTTGGCATCTGGCAGGTTTGAGGAAGCTGTGACAGCAGCTCAGCAAGCAGTTAAAGTTGATCCAGGCAATAGAGAGCTGAATGCAATGGTAAAGAAGGCCAGAGCAGCAACATCAGCTAGAATGAGCGGAAACTTGCTCTTCAAGGCTTCGAAATTCATCGAAGCATGTGCCGTGTACAACGAAGGACTAGAGCATGATCCACACAACTCAGTTCTACTATGCAACAGAGCTGCATGTCGTTCCAAACTTGGTCAAAATGAGAAAGCAATTGAAGATTGTAACGCGGCACTTATGGTTCAGCCAAGTTATAGCAAAGCAAAGTTAAGGAGGGCAAATTGCAATGCCAAGTTGGAACGGTGGGAAGCTGCTATTCAAGACTATGAAATGCTATTAAGAGAAAGGCCAGGGGATGAGGAAGTGGCAAGGGCTTTGTTTGAAGCTCAGCTCCAACTCAAGATGCTGCGTGGTGAAGATATTAAGGACTTGAAATTTGGTTCAAACTTGGTTTCCATCTCAAGTAATGATCGGTTCAGACATTATGTAACCTCACCTGGTATGGCTGTGGCGCTTTTTACCAACAAGGCAACCCACAAGAAAGTGTTGCTTGTGTTGGAGCAAATCAGCAAGAGATTCCCATCAGTTAATTTCCTCAAGGTGGAAATCGAAGACCACCCCTACTTAGCAAAGTCAGAAAGTGTGAGCTCTATCCCAGCCTTCAAGATATACAAGAACGGATCAAGCGTTAAAGAAATTTCAGGAAACAACCACGAGTTGTTAGAAAGATCAGTTAAATTGTATAGCAGCTGA

>Glyma14g34640.2   sequence type=CDS   gene model=Glyma14g34640   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAAATGAAGGCAAAGAACAACAAGAAGGTAGGGAGTGAATTGGGTTGTGGTCTCATGGGGAGAATTCTCCACCTCAAAAGCCATAAGATGAGAAAAGCATCTGTTCATTCCCTACCCTTTAAGAATGCACAGAGTGATGATGATGTCAAAAGTGAAGAATCAAAGGTTTCAAGAAAAAGATCCACTGGCACTGAGCCACCACACAAACCGAGTGGTGTAGAACAAAAACCTGCCAGAAAAAGTGCCTCTATTCACCAACAACCTTGTACAAATCGAAACAACCAACATCAGAGGCATTCAGATGTTGCTGCAAGAAGCTCAACATCATCGTCCTCTAGTACCTCAATTTCAACTAAGGTTGTTCAACAAAACAAGGACAAAAGTCATGAGAGAAAACCACAAGGACAGCCCACTGGAAATTCTCTTGTGCTTGCTAGGATAAGTACTAGCAATGAGAATAATGAGAACAACAAGTCTCAATTGAAACTCACTGGGAATTTGCTTGTGAATAACACCCCAAGAAGGAAGAGTGTGGAATACATGCCTAAGAGTGCAGAGTTGAACTCTGTGCCCAGTTCTTACACCAATGCAAGCAAAGGCTTGATGGGGAATATCTTGAATAGGAACAGCGATGGCAATAAGGTTGCACAGTTTTTGAGTCCAAGGATGAAAAAAGTGGACCCTGAGGTGTCGAAATCCATGGGAAATGATGCATACAAGCAGGGAAGATTTGAAGAGGCCTTGGCTCTGTATGATCGAGCAATTGCACTTGATTCAAATAAGGCAATATATCATTGCAACAAAAGTGCAGCTTTAATTGGCTTAGGAAGGCTTCAGGAAGCAATTGTTGAGTGTGAGGAATCAATCAAGCTGGACCCTTCATATGTCAGAGCCCACAACCGTTTGGCCACAATATATTTCAGGTTGGGAGAAGCAGAAAAAGCACTGAATTGCAATCAGATAACCCCATATGTTGATTCAATACTTACTTTCCAAGCTCAGGCTCTTCAAAATCACCTTAAAAAATGCATAGAAGCACGGAAAGTCAATGCATGGAGTGATATACTAAAGGAAACACAGTCTGCAATATCCTTAGGTTCTGATTCAGCTCCACAGGTCTACGCTTTACAAATTGAAGCCTTGCTGAAGCTCTTAAGATATCAAGAGGCCTATACCATCTACAATAAAATGCCAAAATTTTCAATTGATTGGTGTACCAAGATATTTGGCCCAGCTTGTAGCGCTTACCTATTGATGATAGGCTCAATGATTTACTTGGCATCTGGCAGGTTTGAGGAAGCTGTGACAGCAGCTCAGCAAGCAGTTAAAGTTGATCCAGGCAATAGAGAGCTGAATGCAATGGTAAAGAAGGCCAGAGCAGCAACATCAGCTAGAATGAGCGGAAACTTGCTCTTCAAGGCTTCGAAATTCATCGAAGCATGTGCCGTGTACAACGAAGGACTAGAGCATGATCCACACAACTCAGTTCTACTATGCAACAGAGCTGCATGTCGTTCCAAACTTGGTCAAAATGAGAAAGCAATTGAAGATTGTAACGCGGCACTTATGGTTCAGCCAAGTTATAGCAAAGCAAAGTTAAGGAGGGCAAATTGCAATGCCAAGTTGGAACGGTGGGAAGCTGCTATTCAAGACTATGAAATGCTATTAAGAGAAAGGCCAGGGGATGAGGAAGTGGCAAGGGCTTTGTTTGAAGCTCAGCTCCAACTCAAGATGCTGCGTGGTGAAGATATTAAGGACTTGAAATTTGGTTCAAACTTGGTTTCCATCTCAAGTAATGATCGGTTCAGACATTATGTAACCTCACCTGGTAAGACACATTTGGCTGCTTCTGTTGTATAA

>Glyma14g34640.1   sequence type=predicted peptide   gene model=Glyma14g34640   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MEMKAKNNKKVGSELGCGLMGRILHLKSHKMRKASVHSLPFKNAQSDDDVKSEESKVSRKRSTGTEPPHKPSGVEQKPARKSASIHQQPCTNRNNQHQRHSDVAARSSTSSSSSTSISTKVVQQNKDKSHERKPQGQPTGNSLVLARISTSNENNENNKSQLKLTGNLLVNNTPRRKSVEYMPKSAELNSVPSSYTNASKGLMGNILNRNSDGNKVAQFLSPRMKKVDPEVSKSMGNDAYKQGRFEEALALYDRAIALDSNKAIYHCNKSAALIGLGRLQEAIVECEESIKLDPSYVRAHNRLATIYFRLGEAEKALNCNQITPYVDSILTFQAQALQNHLKKCIEARKVNAWSDILKETQSAISLGSDSAPQVYALQIEALLKLLRYQEAYTIYNKMPKFSIDWCTKIFGPACSAYLLMIGSMIYLASGRFEEAVTAAQQAVKVDPGNRELNAMVKKARAATSARMSGNLLFKASKFIEACAVYNEGLEHDPHNSVLLCNRAACRSKLGQNEKAIEDCNAALMVQPSYSKAKLRRANCNAKLERWEAAIQDYEMLLRERPGDEEVARALFEAQLQLKMLRGEDIKDLKFGSNLVSISSNDRFRHYVTSPGMAVALFTNKATHKKVLLVLEQISKRFPSVNFLKVEIEDHPYLAKSESVSSIPAFKIYKNGSSVKEISGNNHELLERSVKLYSS*

>Glyma14g34640.2   sequence type=predicted peptide   gene model=Glyma14g34640   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MEMKAKNNKKVGSELGCGLMGRILHLKSHKMRKASVHSLPFKNAQSDDDVKSEESKVSRKRSTGTEPPHKPSGVEQKPARKSASIHQQPCTNRNNQHQRHSDVAARSSTSSSSSTSISTKVVQQNKDKSHERKPQGQPTGNSLVLARISTSNENNENNKSQLKLTGNLLVNNTPRRKSVEYMPKSAELNSVPSSYTNASKGLMGNILNRNSDGNKVAQFLSPRMKKVDPEVSKSMGNDAYKQGRFEEALALYDRAIALDSNKAIYHCNKSAALIGLGRLQEAIVECEESIKLDPSYVRAHNRLATIYFRLGEAEKALNCNQITPYVDSILTFQAQALQNHLKKCIEARKVNAWSDILKETQSAISLGSDSAPQVYALQIEALLKLLRYQEAYTIYNKMPKFSIDWCTKIFGPACSAYLLMIGSMIYLASGRFEEAVTAAQQAVKVDPGNRELNAMVKKARAATSARMSGNLLFKASKFIEACAVYNEGLEHDPHNSVLLCNRAACRSKLGQNEKAIEDCNAALMVQPSYSKAKLRRANCNAKLERWEAAIQDYEMLLRERPGDEEVARALFEAQLQLKMLRGEDIKDLKFGSNLVSISSNDRFRHYVTSPGKTHLAASVV*







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