|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT1G75760 | AT | Annotation by Michelle Graham. TAIR10: ER lumen protein retaining receptor family protein | chr1:28446940-28448421 REVERSE LENGTH=272 | SoyBase | E_val: 1.00E-44 | ISS |
GO:0006007 | GO-bp | Annotation by Michelle Graham. GO Biological Process: glucose catabolic process | SoyBase | N/A | ISS |
GO:0006621 | GO-bp | Annotation by Michelle Graham. GO Biological Process: protein retention in ER lumen | SoyBase | N/A | ISS |
GO:0015031 | GO-bp | Annotation by Michelle Graham. GO Biological Process: protein transport | SoyBase | N/A | ISS |
GO:0016021 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane | SoyBase | N/A | ISS |
GO:0046923 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ER retention sequence binding | SoyBase | N/A | ISS |
PTHR10585 | Panther | ER LUMEN PROTEIN RETAINING RECEPTOR-RELATED | JGI | ISS | |
PTHR10585:SF10 | Panther | ER LUMEN PROTEIN RETAINING RECEPTOR | JGI | ISS | |
PF00810 | PFAM | ER lumen protein retaining receptor | JGI | ISS | |
UniRef100_B9R890 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: ER lumen protein retaining receptor, putative n=1 Tax=Ricinus communis RepID=B9R890_RICCO | SoyBase | E_val: 1.00E-42 | ISS |
UniRef100_UPI000233BC71 | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI000233BC71 related cluster n=1 Tax=unknown RepID=UPI000233BC71 | SoyBase | E_val: 5.00E-49 | ISS |
Glyma14g34545 not represented in the dataset |
Glyma14g34545 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.14g171200 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma14g34545.1 sequence type=CDS gene model=Glyma14g34545 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGCGTTTCAAATTGAAATCTAGTTATATAGATGATAAGGACAACCTTGCAATATACTATGTGGTAATACCTTGTGTTGTGTTGTCCTTGTTAATTCATCCAATAACCTGGCATCATCCACTTAATAGGATTCTCTGGGCATTTTGTGTTTATCTTGAAGCTGTTTCTGTTCTCCCTCAGCTACAAGTCATGCAGAACACTAAGATTGTTGAACCATTCACAGCACACTATGTTTTTTTCTCTGGGAGTTGCAAGTTTCTTGAGTTGTGCACATTGGGTCCTCCAGGTTTGTCAAAATTTGAACTCCTCTAA
>Glyma14g34545.1 sequence type=predicted peptide gene model=Glyma14g34545 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MRFKLKSSYIDDKDNLAIYYVVIPCVVLSLLIHPITWHHPLNRILWAFCVYLEAVSVLPQLQVMQNTKIVEPFTAHYVFFSGSCKFLELCTLGPPGLSKFELL*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||