|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT3G27030 | AT | Annotation by Michelle Graham. TAIR10: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3339 (InterPro:IPR021775); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF 3339) (TAIR:AT5G40970.1); Has 538 Blast hits to 271 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 534; Viruses - 4; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:9 | SoyBase | E_val: 2.00E-27 | ISS |
GO:0008150 | GO-bp | Annotation by Michelle Graham. GO Biological Process: biological process | SoyBase | N/A | ISS |
GO:0003674 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: molecular function | SoyBase | N/A | ISS |
PF11820 | PFAM | Protein of unknown function (DUF3339) | JGI | ISS | |
UniRef100_I1MAQ7 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1MAQ7_SOYBN | SoyBase | E_val: 2.00E-40 | ISS |
UniRef100_Q9FLN2 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Emb|CAB62355.1 n=1 Tax=Arabidopsis thaliana RepID=Q9FLN2_ARATH | SoyBase | E_val: 2.00E-24 | ISS |
Glyma14g34190 not represented in the dataset |
Glyma14g34190 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.14g169000 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma14g34190.1 sequence type=CDS gene model=Glyma14g34190 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGAGTGATTGGGCACCAGTGTTGATCGGGGTGGTTCTGTTCGTGCTGCTCCAACCAGTGTTGCTTTTCTCCTTTCCTGGGAATGGGGAGCAGCTTGAGTTCGGTAGCATGAAGACCAACGACAAAGCCATTTTCATCCACATGCTCATCTTCTTCGCGCTCTACTATGTCCTCATCCTCGCCGTTAAAATCCATATCTACACCAGCTGA
>Glyma14g34190.1 sequence type=predicted peptide gene model=Glyma14g34190 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MSDWAPVLIGVVLFVLLQPVLLFSFPGNGEQLEFGSMKTNDKAIFIHMLIFFALYYVLILAVKIHIYTS*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||