Glyma14g34170 - SoyBase

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Report for Sequence Feature Glyma14g34170

Feature Type:	gene_model
Chromosome:	Gm14
Start:	42529134
stop:	42532490
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g34170

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G10180	AT	Annotation by Michelle Graham. TAIR10: slufate transporter 2;1 \| chr5:3193225-3196818 FORWARD LENGTH=677	SoyBase	E_val: 4.00E-22	ISS
GO:0006810	GO-bp	Annotation by Michelle Graham. GO Biological Process: transport	SoyBase	N/A	ISS
GO:0008272	GO-bp	Annotation by Michelle Graham. GO Biological Process: sulfate transport	SoyBase	N/A	ISS
GO:0009684	GO-bp	Annotation by Michelle Graham. GO Biological Process: indoleacetic acid biosynthetic process	SoyBase	N/A	ISS
GO:0019344	GO-bp	Annotation by Michelle Graham. GO Biological Process: cysteine biosynthetic process	SoyBase	N/A	ISS
GO:0019761	GO-bp	Annotation by Michelle Graham. GO Biological Process: glucosinolate biosynthetic process	SoyBase	N/A	ISS
GO:0030003	GO-bp	Annotation by Michelle Graham. GO Biological Process: cellular cation homeostasis	SoyBase	N/A	ISS
GO:0055085	GO-bp	Annotation by Michelle Graham. GO Biological Process: transmembrane transport	SoyBase	N/A	ISS
GO:0070838	GO-bp	Annotation by Michelle Graham. GO Biological Process: divalent metal ion transport	SoyBase	N/A	ISS
GO:0016020	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: membrane	SoyBase	N/A	ISS
GO:0016021	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane	SoyBase	N/A	ISS
GO:0005215	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transporter activity	SoyBase	N/A	ISS
GO:0008271	GO-mf	Annotation by Michelle Graham. GO Molecular Function: secondary active sulfate transmembrane transporter activity	SoyBase	N/A	ISS
GO:0015116	GO-mf	Annotation by Michelle Graham. GO Molecular Function: sulfate transmembrane transporter activity	SoyBase	N/A	ISS
PTHR11814	Panther	SULFATE TRANSPORTER	JGI		ISS
PTHR11814:SF46	Panther	SUBFAMILY NOT NAMED	JGI		ISS
PF00916	PFAM	Sulfate transporter family	JGI		ISS
PF08156	PFAM	NOP5NT (NUC127) domain	JGI		ISS
UniRef100_G7J4D0	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Sulfate/bicarbonate/oxalate exchanger and transporter sat-1 n=1 Tax=Medicago truncatula RepID=G7J4D0_MEDTR	SoyBase	E_val: 3.00E-23	ISS
UniRef100_UPI0002337DE9	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI0002337DE9 related cluster n=1 Tax=unknown RepID=UPI0002337DE9	SoyBase	E_val: 4.00E-26	ISS

Expression Patterns of Glyma14g34170

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g34170 not represented in the dataset	Glyma14g34170 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g34170 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments

References for Glyma14g34170

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma14g34170

Limit To All Plant Sequences

>Glyma14g34170.1   sequence type=CDS   gene model=Glyma14g34170   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTCCACATTGTGTCCCTGCTCCGTTTTAGGGTTGCAATAGCGTTGTTCCTCCTCTACAAGTCGGCGTCGGGTTACGCTCTCTTGGAGGCGCATGGCCTCGACGAAATTGGACACAACACGGAGGCTGTTCGCAACTCCGTTTCAGACCTCAACAGGTTTGGCAAGGTTGTCAAGTGCCGCTCCTTCAACCCCTTCAACTCCTTCAACAGCTATTGTACTTTTACCCCAACTACTATTCTCGCTTCAATAATCCTTTCTGCTCTCCCGGGACTCATTGACATCAATGAAGCTTACAAAATATGGAAAGTTGATAAGCTTGATTTTCTTGCTTGTGTTGGAGCCTTCTTCGGTGTGCTCTTTGCGTCAGTGGAAGTTGGTCTGCTAGTGGCTAGTGGTGATGATGGAGTGAGATTGATAGAAATGGGAGGAGGCAGGGATGGGGGGGCTCATTTAATATGGTCACATGATGCACTAATCCTATCTCTCCCTCCCTTCGACAGAGACTTGCTTTTAATGTTTCAGACCATCTCATTCAATTTCCTCACTATCATATGGACCACCTCTTTCCCCTCAATTCACCCCTATTCAAGAGGAGCGTGA

Predicted protein sequences of Glyma14g34170

Limit To All Plant Sequences

>Glyma14g34170.1   sequence type=predicted peptide   gene model=Glyma14g34170   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MFHIVSLLRFRVAIALFLLYKSASGYALLEAHGLDEIGHNTEAVRNSVSDLNRFGKVVKCRSFNPFNSFNSYCTFTPTTILASIILSALPGLIDINEAYKIWKVDKLDFLACVGAFFGVLFASVEVGLLVASGDDGVRLIEMGGGRDGGAHLIWSHDALILSLPPFDRDLLLMFQTISFNFLTIIWTTSFPSIHPYSRGA*

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