|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G57390 | AT | Annotation by Michelle Graham. TAIR10: AINTEGUMENTA-like 5 | chr5:23253459-23256437 REVERSE LENGTH=558 | SoyBase | E_val: 5.00E-12 | ISS |
GO:0006355 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of transcription, DNA-dependent | SoyBase | N/A | ISS |
GO:0009640 | GO-bp | Annotation by Michelle Graham. GO Biological Process: photomorphogenesis | SoyBase | N/A | ISS |
GO:0009737 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to abscisic acid stimulus | SoyBase | N/A | ISS |
GO:0009791 | GO-bp | Annotation by Michelle Graham. GO Biological Process: post-embryonic development | SoyBase | N/A | ISS |
GO:0009793 | GO-bp | Annotation by Michelle Graham. GO Biological Process: embryo development ending in seed dormancy | SoyBase | N/A | ISS |
GO:0009845 | GO-bp | Annotation by Michelle Graham. GO Biological Process: seed germination | SoyBase | N/A | ISS |
GO:0009887 | GO-bp | Annotation by Michelle Graham. GO Biological Process: organ morphogenesis | SoyBase | N/A | ISS |
GO:0009909 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of flower development | SoyBase | N/A | ISS |
GO:0009933 | GO-bp | Annotation by Michelle Graham. GO Biological Process: meristem structural organization | SoyBase | N/A | ISS |
GO:0010162 | GO-bp | Annotation by Michelle Graham. GO Biological Process: seed dormancy process | SoyBase | N/A | ISS |
GO:0010182 | GO-bp | Annotation by Michelle Graham. GO Biological Process: sugar mediated signaling pathway | SoyBase | N/A | ISS |
GO:0010228 | GO-bp | Annotation by Michelle Graham. GO Biological Process: vegetative to reproductive phase transition of meristem | SoyBase | N/A | ISS |
GO:0016567 | GO-bp | Annotation by Michelle Graham. GO Biological Process: protein ubiquitination | SoyBase | N/A | ISS |
GO:0019915 | GO-bp | Annotation by Michelle Graham. GO Biological Process: lipid storage | SoyBase | N/A | ISS |
GO:0040019 | GO-bp | Annotation by Michelle Graham. GO Biological Process: positive regulation of embryonic development | SoyBase | N/A | ISS |
GO:0048364 | GO-bp | Annotation by Michelle Graham. GO Biological Process: root development | SoyBase | N/A | ISS |
GO:0050826 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to freezing | SoyBase | N/A | ISS |
GO:0060771 | GO-bp | Annotation by Michelle Graham. GO Biological Process: phyllotactic patterning | SoyBase | N/A | ISS |
GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
GO:0003677 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: DNA binding | SoyBase | N/A | ISS |
GO:0003700 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: sequence-specific DNA binding transcription factor activity | SoyBase | N/A | ISS |
UniRef100_E3V058 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Aintegumenta-like 5 n=1 Tax=Glycine max RepID=E3V058_SOYBN | SoyBase | E_val: 9.00E-122 | ISS |
UniRef100_I1MSQ3 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MSQ3_SOYBN | SoyBase | E_val: 7.00E-123 | ISS |
Glyma14g34070 not represented in the dataset |
Glyma14g34070 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma14g34070.1 sequence type=CDS gene model=Glyma14g34070 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high GGATTAAATGCAGTAACAAACTTTGACATGAGTCGCTACGACGTGAAGAGCATTGCAAATAGTACTCTTCCTATTGGTGGTTTATCTGGCAAGAACAAGAACTCCACAGATTCTGCATCTGAGAGCAAAAGCCATGAGCCAAGCCAATCCGATGGAGATCCATCATCGGCTTCATCGCAACAACCTTCAAGCTCCAACTTAAGCTTTGCCATACCCATTAAGCAAGACCCTTCAGATTACTGGTCCATCTTGGGGTACCATAATACTCCCCTTGACAACAGTGGCATCAGGAACACTACTAGTACTGTTACTACAACTACTTTTCCATCCTCCAACAATGGCACTGCTAGTAGTTTGACACCCTTCAACATGGAGTTCTCAAGTGCCCCCTCAAGTACCGGCAGCGATAACAATGCCGCGTTTTTCAGTGGAGGAGGCATCTTTGTTCAGCAACAAACTAGTCATGGTCATGGAAATGGAAGCAGTGGTTCCTCCTCTTCTTCTTTAAGCTGTTCAATCCCATTTGCCACGCCCATATTTTCTCTAAATAGCAATACTAGTTATGAGAGCAGTGCTGGTTATGGAAACTGGATTGGACCTACCCTGCACACATTCCAATCCCATGCAAAACCA
>Glyma14g34070.1 sequence type=predicted peptide gene model=Glyma14g34070 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high GLNAVTNFDMSRYDVKSIANSTLPIGGLSGKNKNSTDSASESKSHEPSQSDGDPSSASSQQPSSSNLSFAIPIKQDPSDYWSILGYHNTPLDNSGIRNTTSTVTTTTFPSSNNGTASSLTPFNMEFSSAPSSTGSDNNAAFFSGGGIFVQQQTSHGHGNGSSGSSSSSLSCSIPFATPIFSLNSNTSYESSAGYGNWIGPTLHTFQSHAKP
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||