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Integrating Genetics and Genomics to Advance Soybean Research




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Report for Sequence Feature Glyma14g34035

Feature Type:gene_model
Chromosome:Gm14
Start:42426571
stop:42428113
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G61300AT Annotation by Michelle Graham. TAIR10: LRR and NB-ARC domains-containing disease resistance protein | chr1:22607714-22610175 REVERSE LENGTH=762 SoyBaseE_val: 2.00E-40ISS
GO:0006499GO-bp Annotation by Michelle Graham. GO Biological Process: N-terminal protein myristoylation SoyBaseN/AISS
GO:0006952GO-bp Annotation by Michelle Graham. GO Biological Process: defense response SoyBaseN/AISS
GO:0005829GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytosol SoyBaseN/AISS
GO:0043531GO-mf Annotation by Michelle Graham. GO Molecular Function: ADP binding SoyBaseN/AISS
PTHR23155Panther LEUCINE-RICH REPEAT-CONTAINING PROTEIN JGI ISS
PTHR23155:SF108Panther SUBFAMILY NOT NAMED JGI ISS
PF00931PFAM NB-ARC domain JGI ISS
UniRef100_B9N1L5UniRef Annotation by Michelle Graham. Most informative UniRef hit: BED finger-nbs-lrr resistance protein n=1 Tax=Populus trichocarpa RepID=B9N1L5_POPTR SoyBaseE_val: 5.00E-53ISS
UniRef100_I1N4W5UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1N4W5_SOYBN SoyBaseE_val: 2.00E-160ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g34035 not represented in the dataset

Glyma14g34035 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments
Glyma.14g168300 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma14g34035.1   sequence type=CDS   gene model=Glyma14g34035   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGATTGCAAAGGAGATTCTTCAGAAGAATTGGAATGACAAAGACATGATAGGGTGGTCGTTCTCCAGAAGAATTGGTCAATTGTGTATATTCCAGCAAGTTGAGATGAGTGGAGGCACACATAACCAAAACAATGAAACAGGTGATGTAAAAGATCATACGAACGGAGGTAGCAATGGTGATGATGCTTTGACTATAAATCAGTTGCTATCCAGACTAACAAGGGCAGAAGACAACATTGATAAAAAATTACAGTGGCTGGAGTTCCAGGGCAATAAGCGCAAGAGACAAGATGACGATTGGTTGGATAAACTAAAGGACCTGAAAAAAAGAGCTATTGATGTGAAAAACTCACTGCATCAGTCTGGGTCGACTAATGAATTCCCCGAGCCTTATGAATTGGATGAGCGAGATGAAAATATGGAGAAGATGTGGGATCTTCTGGAGCATGAGGAAGTTTTGATTATTGGCATAGATGGAATGGGGGGAGTTGGAAAAACATTCATGGCAACTCATTTCAAGAATGAGATTAAAAGAAAGGGGACTTTCAAGGATGTCTTCTGGGTCACTGTTTTCGATGATTTCACCACTTTCAAATTGCAACATGACATTGCAGCAACAATACAGGTTAAGCTTTACGGAGATGAGATGACTAGAGCAACAATTTTGACGTTAGAGTTGGAGAAAAGAGGAAAAACACTGCTTATTTTGGATGATGTTTGGGAATATATTGATCTGCAAAAGGTGGGGATTCCTCTTAAAGTGAATGGCATTAAATTGATTATCACAACTCGTTTGAAACATGTGTGTCTACAGATGGATTGCCTACCAAATAATATAATAAGAATGCACCCTCTCTCTGGTGAAGAAGCTTGGGAGTTATTTTTGCTAAAACTTGGACACCGTGGAACACCTGCAAGACTTCCCCCTCATGTACTAGAGATTGCAAGATCTGTTGTAATGAAATGTGATGGTTTACAACTTGGAATCAGTGTGATGGCTCGAACCATGAAAGGGAAAAATGAGATCTATTGGTGGAGACATGCATTGAATATACTTGACAGATTGGAGATGGGAGAAGAGGTCTTAAGCGTACTAAAACGTAGCTATGACAATTTAATTGAAAAGGACATTCAAAAATGTTTCTTACGATCTGCACTGTTTCCTAATGAGACTAGGAAAGAGGAATGGGTTATGATGGTTGTTGAGAGTGGTGGCACAGTGAGTTTGTTTGTGATATTCCAGCAAGCATAG

>Glyma14g34035.1   sequence type=predicted peptide   gene model=Glyma14g34035   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MIAKEILQKNWNDKDMIGWSFSRRIGQLCIFQQVEMSGGTHNQNNETGDVKDHTNGGSNGDDALTINQLLSRLTRAEDNIDKKLQWLEFQGNKRKRQDDDWLDKLKDLKKRAIDVKNSLHQSGSTNEFPEPYELDERDENMEKMWDLLEHEEVLIIGIDGMGGVGKTFMATHFKNEIKRKGTFKDVFWVTVFDDFTTFKLQHDIAATIQVKLYGDEMTRATILTLELEKRGKTLLILDDVWEYIDLQKVGIPLKVNGIKLIITTRLKHVCLQMDCLPNNIIRMHPLSGEEAWELFLLKLGHRGTPARLPPHVLEIARSVVMKCDGLQLGISVMARTMKGKNEIYWWRHALNILDRLEMGEEVLSVLKRSYDNLIEKDIQKCFLRSALFPNETRKEEWVMMVVESGGTVSLFVIFQQA*







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