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Report for Sequence Feature Glyma14g33860

Feature Type:gene_model
Chromosome:Gm14
Start:42219448
stop:42221973
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G02390AT Annotation by Michelle Graham. TAIR10: glycerol-3-phosphate acyltransferase 2 | chr1:480921-483163 FORWARD LENGTH=530 SoyBaseE_val: 6.00E-172ISS
GO:0006655GO-bp Annotation by Michelle Graham. GO Biological Process: phosphatidylglycerol biosynthetic process SoyBaseN/AISS
GO:0008152GO-bp Annotation by Michelle Graham. GO Biological Process: metabolic process SoyBaseN/AISS
GO:0005739GO-cc Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion SoyBaseN/AISS
GO:0016746GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring acyl groups SoyBaseN/AISS
PTHR15486Panther ANCIENT UBIQUITOUS PROTEIN JGI ISS
PF01553PFAM Acyltransferase JGI ISS
UniRef100_G7K9Z4UniRef Annotation by Michelle Graham. Most informative UniRef hit: Glycerol-3-phosphate acyltransferase n=1 Tax=Medicago truncatula RepID=G7K9Z4_MEDTR SoyBaseE_val: 0ISS
UniRef100_UPI000233BB0EUniRef Annotation by Michelle Graham. Best UniRef hit: UPI000233BB0E related cluster n=1 Tax=unknown RepID=UPI000233BB0E SoyBaseE_val: 0ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g33860 not represented in the dataset

Glyma14g33860 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments
Glyma.14g167400 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma14g33860.2   sequence type=transcript   gene model=Glyma14g33860   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAACACATGACCTCTCATCCACGTAGTCTTTCGTTATTTAATTCTTAGGCTTTTGTGACTTTTGAGACATCACATTCCACTGATATTTATCTTTAGGCCTTTTGAATTCTCTTATTTAATTGACTAACCATAGCAACTCGATTATCATTTTTCAATTCTTATCATCAAAACTGGTCCCAAGGAGCCAGAAACACCAAAGCCAAAAACACTTCCTTTGTTACACAAGATGAAAACAGTTTCTCTTGTCCACAAAACAGAAGAACTGGCTAATAAAACAGTGGTTTTTGATTTTGAGGGTACCTTGTTAAGATCAGCTTCACTGTTTCCTTACTTCATGCTGGTTGCTTTTGAAGCTGGTGGGTTGCTAAGGTCTCTCGTGTTGTTTGTCTCATACCCTTTGGTGTGGCTGGTTGGTGAAGATCAACTTGGCTTGAAGATCATGGTTTTCTTGACCCTTTTTGGCATAAAAAAGGACACGTTCAGAATAGGGTCAGCTGTTCTGCCAAAGTTCTTCTTAGAAAACATGGGGTGGGAAGGCTTTGAAGCTATTATGCGTTGTAACAAAAAGGTGGCATCAAGTAAGTTGCCAAGGGCCATGGTTGAAGGTTTCTTGAAGGACTACTTGGGGGTTGAGGGTGTTATAGCAAGAGACATCAAGTCCTTCAAAGGGTATTTTTTGGGATTGTTTGAGGAAAAGAAGGAAAACAACACCCCTACCCATATATATGATGAGGCTACAGCAGGCAACGACAACACTATTAGTATCACTGGTAGCCATATTGAGTATATTGACCAAGAGCTTTTCCCTTATTTCAAGAAGGTTTGCTTAATGTTAAGCTCAGAGGAGAGGAGAAATTGGCATGTCCTTCCAAAAGAGAGGTATCCAAAGCCATTGATCTTCCATGATGGAAGGTTGGCATTCAGGCCAACCCCTGCATCTTCTCTAGCTTTCTTCATGTGGTTACCCCTTGGACTATTCCTTTCCATCTGCAGATTCACCTTTGGCACTGCATTGCCCTTCAATTTATCTGCTCCAGTATTGGCCTTCTCAGGAACAAGAACCACTCTTTCAAGACCCCAAAACCCTTTGTCATTGGTCCAAAATGAGGAAAACCAAAAGGGCATGCTCTATGTGTGCAACCACAGAACCTTGCTTGACCCTCTTTACATTGCATATGTTTTGGACAAACCTCTCTCTGCAGTTACATACAGCTTGAGCAGATTCAATGAGCTAGTAGCCCCCATCAGAACCATAAGACTAACAAGGGACAGAGAAAGAGACAGAGAAACAATGGACAAATTGCTGAGCCTAGGAAACCTTGTGGTGTGTCCTGAGGGAACAACTTGCAGGGAACCTTATTTGCTAAGGTTCAGTCCTTTGTTTGCTGAACTCACTGATGACATTGTTCCTGTGGCGGTTGATGTTAAGGTTAGCATGTTCTATGGAACAACAGCTAGTGGACACAAATGTTTGGACCCGTTTTTCCACTTCATGAACCCGAATCCCACGTACTTCATTAAAATCCTCGACAGGGTACCGCTGTCAGAAACATGTCTTGGAGGTGGAAGATCAAGAATTGAAGTTGCCAATTTTGTGCAACGTGAGATTGGGAATGCTTTAGGATTTGCATGCACCAGCTTGACCAGAAAAGACAAGTACATGATCTTGGCAGGTAACGAGGGTGTCAATGAAGGGCCTTGTCATAACTGCAAGTAGCTACTGGCTTTGTGTCAAACTTTAGAGAGAAGAAATTATTACATAATCCGAGAAGTATGATGGTGTCTACCAATTTTCATGTAACATGTTACGGAGTTTTCCCGAATCTTTTTCATGAAATGAAATTCTCAATTGCATATCATATAAATTAAGATTGGTTGTATGGTGGTCGCGCATCATGTAATACTTTTTTCTTAAGCAACAAATAGTTATGAATGTTACACGTATGTGATGATACTTACATGGTTAACTTTTTTATGCTGTCGTTGTAGTACCAAAAGTCTAATGTTCTTCTATGTTTATGACTATTGCAGCGCTTGTGTTGATAA

>Glyma14g33860.1   sequence type=CDS   gene model=Glyma14g33860   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAAAACAGTTTCTCTTGTCCACAAAACAGAAGAACTGGCTAATAAAACAGTGGTTTTTGATTTTGAGGGTACCTTGTTAAGATCAGCTTCACTGTTTCCTTACTTCATGCTGGTTGCTTTTGAAGCTGGTGGGTTGCTAAGGTCTCTCGTGTTGTTTGTCTCATACCCTTTGGTGTGGCTGGTTGGTGAAGATCAACTTGGCTTGAAGATCATGGTTTTCTTGACCCTTTTTGGCATAAAAAAGGACACGTTCAGAATAGGGTCAGCTGTTCTGCCAAAGTTCTTCTTAGAAAACATGGGGTGGGAAGGCTTTGAAGCTATTATGCGTTGTAACAAAAAGGTGGCATCAAGTAAGTTGCCAAGGGCCATGGTTGAAGGTTTCTTGAAGGACTACTTGGGGGTTGAGGGTGTTATAGCAAGAGACATCAAGTCCTTCAAAGGGTATTTTTTGGGATTGTTTGAGGAAAAGAAGGAAAACAACACCCCTACCCATATATATGATGAGGCTACAGCAGGCAACGACAACACTATTAGTATCACTGGTAGCCATATTGAGTATATTGACCAAGAGCTTTTCCCTTATTTCAAGCAGAAGGTTTGCTTAATGTTAAGCTCAGAGGAGAGGAGAAATTGGCATGTCCTTCCAAAAGAGAGGTATCCAAAGCCATTGATCTTCCATGATGGAAGGTTGGCATTCAGGCCAACCCCTGCATCTTCTCTAGCTTTCTTCATGTGGTTACCCCTTGGACTATTCCTTTCCATCTGCAGATTCACCTTTGGCACTGCATTGCCCTTCAATTTATCTGCTCCAGTATTGGCCTTCTCAGGAACAAGAACCACTCTTTCAAGACCCCAAAACCCTTTGTCATTGGTCCAAAATGAGGAAAACCAAAAGGGCATGCTCTATGTGTGCAACCACAGAACCTTGCTTGACCCTCTTTACATTGCATATGTTTTGGACAAACCTCTCTCTGCAGTTACATACAGCTTGAGCAGATTCAATGAGCTAGTAGCCCCCATCAGAACCATAAGACTAACAAGGGACAGAGAAAGAGACAGAGAAACAATGGACAAATTGCTGAGCCTAGGAAACCTTGTGGTGTGTCCTGAGGGAACAACTTGCAGGGAACCTTATTTGCTAAGGTTCAGTCCTTTGTTTGCTGAACTCACTGATGACATTGTTCCTGTGGCGGTTGATGTTAAGGTTAGCATGTTCTATGGAACAACAGCTAGTGGACACAAATGTTTGGACCCGTTTTTCCACTTCATGAACCCGAATCCCACGTACTTCATTAAAATCCTCGACAGGGTACCGCTGTCAGAAACATGTCTTGGAGGTGGAAGATCAAGAATTGAAGTTGCCAATTTTGTGCAACGTGAGATTGGGAATGCTTTAGGATTTGCATGCACCAGCTTGACCAGAAAAGACAAGTACATGATCTTGGCAGGTAACGAGGGTGTCAATGAAGGGCCTTGTCATAACTGCAAGTAG

>Glyma14g33860.2   sequence type=CDS   gene model=Glyma14g33860   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAAAACAGTTTCTCTTGTCCACAAAACAGAAGAACTGGCTAATAAAACAGTGGTTTTTGATTTTGAGGGTACCTTGTTAAGATCAGCTTCACTGTTTCCTTACTTCATGCTGGTTGCTTTTGAAGCTGGTGGGTTGCTAAGGTCTCTCGTGTTGTTTGTCTCATACCCTTTGGTGTGGCTGGTTGGTGAAGATCAACTTGGCTTGAAGATCATGGTTTTCTTGACCCTTTTTGGCATAAAAAAGGACACGTTCAGAATAGGGTCAGCTGTTCTGCCAAAGTTCTTCTTAGAAAACATGGGGTGGGAAGGCTTTGAAGCTATTATGCGTTGTAACAAAAAGGTGGCATCAAGTAAGTTGCCAAGGGCCATGGTTGAAGGTTTCTTGAAGGACTACTTGGGGGTTGAGGGTGTTATAGCAAGAGACATCAAGTCCTTCAAAGGGTATTTTTTGGGATTGTTTGAGGAAAAGAAGGAAAACAACACCCCTACCCATATATATGATGAGGCTACAGCAGGCAACGACAACACTATTAGTATCACTGGTAGCCATATTGAGTATATTGACCAAGAGCTTTTCCCTTATTTCAAGAAGGTTTGCTTAATGTTAAGCTCAGAGGAGAGGAGAAATTGGCATGTCCTTCCAAAAGAGAGGTATCCAAAGCCATTGATCTTCCATGATGGAAGGTTGGCATTCAGGCCAACCCCTGCATCTTCTCTAGCTTTCTTCATGTGGTTACCCCTTGGACTATTCCTTTCCATCTGCAGATTCACCTTTGGCACTGCATTGCCCTTCAATTTATCTGCTCCAGTATTGGCCTTCTCAGGAACAAGAACCACTCTTTCAAGACCCCAAAACCCTTTGTCATTGGTCCAAAATGAGGAAAACCAAAAGGGCATGCTCTATGTGTGCAACCACAGAACCTTGCTTGACCCTCTTTACATTGCATATGTTTTGGACAAACCTCTCTCTGCAGTTACATACAGCTTGAGCAGATTCAATGAGCTAGTAGCCCCCATCAGAACCATAAGACTAACAAGGGACAGAGAAAGAGACAGAGAAACAATGGACAAATTGCTGAGCCTAGGAAACCTTGTGGTGTGTCCTGAGGGAACAACTTGCAGGGAACCTTATTTGCTAAGGTTCAGTCCTTTGTTTGCTGAACTCACTGATGACATTGTTCCTGTGGCGGTTGATGTTAAGGTTAGCATGTTCTATGGAACAACAGCTAGTGGACACAAATGTTTGGACCCGTTTTTCCACTTCATGAACCCGAATCCCACGTACTTCATTAAAATCCTCGACAGGGTACCGCTGTCAGAAACATGTCTTGGAGGTGGAAGATCAAGAATTGAAGTTGCCAATTTTGTGCAACGTGAGATTGGGAATGCTTTAGGATTTGCATGCACCAGCTTGACCAGAAAAGACAAGTACATGATCTTGGCAGGTAACGAGGGTGTCAATGAAGGGCCTTGTCATAACTGCAAGTAG

>Glyma14g33860.1   sequence type=predicted peptide   gene model=Glyma14g33860   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MKTVSLVHKTEELANKTVVFDFEGTLLRSASLFPYFMLVAFEAGGLLRSLVLFVSYPLVWLVGEDQLGLKIMVFLTLFGIKKDTFRIGSAVLPKFFLENMGWEGFEAIMRCNKKVASSKLPRAMVEGFLKDYLGVEGVIARDIKSFKGYFLGLFEEKKENNTPTHIYDEATAGNDNTISITGSHIEYIDQELFPYFKQKVCLMLSSEERRNWHVLPKERYPKPLIFHDGRLAFRPTPASSLAFFMWLPLGLFLSICRFTFGTALPFNLSAPVLAFSGTRTTLSRPQNPLSLVQNEENQKGMLYVCNHRTLLDPLYIAYVLDKPLSAVTYSLSRFNELVAPIRTIRLTRDRERDRETMDKLLSLGNLVVCPEGTTCREPYLLRFSPLFAELTDDIVPVAVDVKVSMFYGTTASGHKCLDPFFHFMNPNPTYFIKILDRVPLSETCLGGGRSRIEVANFVQREIGNALGFACTSLTRKDKYMILAGNEGVNEGPCHNCK*

>Glyma14g33860.2   sequence type=predicted peptide   gene model=Glyma14g33860   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MKTVSLVHKTEELANKTVVFDFEGTLLRSASLFPYFMLVAFEAGGLLRSLVLFVSYPLVWLVGEDQLGLKIMVFLTLFGIKKDTFRIGSAVLPKFFLENMGWEGFEAIMRCNKKVASSKLPRAMVEGFLKDYLGVEGVIARDIKSFKGYFLGLFEEKKENNTPTHIYDEATAGNDNTISITGSHIEYIDQELFPYFKKVCLMLSSEERRNWHVLPKERYPKPLIFHDGRLAFRPTPASSLAFFMWLPLGLFLSICRFTFGTALPFNLSAPVLAFSGTRTTLSRPQNPLSLVQNEENQKGMLYVCNHRTLLDPLYIAYVLDKPLSAVTYSLSRFNELVAPIRTIRLTRDRERDRETMDKLLSLGNLVVCPEGTTCREPYLLRFSPLFAELTDDIVPVAVDVKVSMFYGTTASGHKCLDPFFHFMNPNPTYFIKILDRVPLSETCLGGGRSRIEVANFVQREIGNALGFACTSLTRKDKYMILAGNEGVNEGPCHNCK*







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