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Report for Sequence Feature Glyma14g33730
Feature Type: gene_model
Chromosome: Gm14
Start: 41889885
stop: 41894154
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma14g33730
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G77850 AT
Annotation by Michelle Graham. TAIR10: auxin response factor 17 | chr1:29272405-29275193 FORWARD LENGTH=585
SoyBase E_val: 9.00E-140 ISS
GO:0006355 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of transcription, DNA-dependent
SoyBase N/A ISS
GO:0009555 GO-bp
Annotation by Michelle Graham. GO Biological Process: pollen development
SoyBase N/A ISS
GO:0009653 GO-bp
Annotation by Michelle Graham. GO Biological Process: anatomical structure morphogenesis
SoyBase N/A ISS
GO:0009725 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to hormone stimulus
SoyBase N/A ISS
GO:0009734 GO-bp
Annotation by Michelle Graham. GO Biological Process: auxin mediated signaling pathway
SoyBase N/A ISS
GO:0048830 GO-bp
Annotation by Michelle Graham. GO Biological Process: adventitious root development
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0003677 GO-mf
Annotation by Michelle Graham. GO Molecular Function: DNA binding
SoyBase N/A ISS
GO:0003700 GO-mf
Annotation by Michelle Graham. GO Molecular Function: sequence-specific DNA binding transcription factor activity
SoyBase N/A ISS
PF02362 PFAM
B3 DNA binding domain
JGI ISS
PF06507 PFAM
Auxin response factor
JGI ISS
UniRef100_B9RJC5 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Auxin response factor, putative n=1 Tax=Ricinus communis RepID=B9RJC5_RICCO
SoyBase E_val: 7.00E-156 ISS
UniRef100_I1MAN4 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MAN4_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma14g33730
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma14g33730
Paralog Evidence Comments
Glyma13g02410 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma14g33730 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.14g166500 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma14g33730
Transcripts of Glyma14g33730
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma14g33730.2 sequence type=transcript gene model=Glyma14g33730 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGTCTCCGCCGCAGCCCCGCCGCGTCGACCCCAAAATCTGGCGGGCATGCGCCGGCGCCGCCGTGCAAATCCCCAAGCTCCATTCTAGGGTTTACTACTTCCCCCAGGGCCACCTGGAGCACGCCTCTCCCTCGCATTACCTCAACCCTCTCCTCCGCTCTCTTCCCTTCGTCCCCTGCCACGTGTCCTCCCTCGATTTCCTCGCCGATCCTTTCTCCGACGAGGTCTTCGCTAAGTTCCTCCTCACGCCCCTCTCGCAACAACCTTTTCCAAACGACACCACGGAGGCTCGAAACGAAGAAGAGAAGGACCGCGAGAACGGCGTCGTTTCGTTCTCGAAGATCCTGACTCCCTCCGACGCCAACAACGGCGGCGGCTTCTCCGTGCCGCGCTACTTGGCGCTTCGCCACATTTACCGCGGCACGCCGCGCCGCCACCTCTTCACCACCGGCTGGAGCAAGTTCGTCAACCACAAAAAGCTCGTCGCCGGCGACACCGTCGTCTTCGTCAAGGACTCCGACGGCAGGGTCTCCGTCGGAATCCGCCGCGCGGCTCGGTTTGCCGCCGCGATCGAGACTCCGCAGCCGCCACCTGCGGAACGGGAGGGGTTTTCGCGGTCCGCGACGGGGAGAGTGACCGCGGAGGCCGTGGCGGCCGCTGCGGAGTCCGCGGCGCGAAACGCTCCGTTCGAGGTGGTGTATTATCCGAGGACCGGTTTTGCGGATTTTGTGGTGAGTGCTGAGGTTGTGGAGGAATCGATGAAGTGCGCGTGGGTTGGTGGAATGAGAGTGAAGATTGCAATGGAGACTGAGGATTCTTCTAGAATGACGTGGTTTCAAGGGACGGTTTCTTCTGCATGTGCTTCTGAGAATGGACCTTGGCGCATGCTTCAGGTTAATTGGGATGAACCTGAAGTCTTGCAGAATGCAAAGCGAGTCAGTCCTTGGCAGGGAGCCAGGCATGATCTATTTTCTCCATCAAGTTTTTCCAACTTTTTAAATGATAAGTCCTATCTGTATATGGGTAGTGGTTCATTTGGGAACAATCCAGTGCAAAGTTTGGGAACTGTGACAACAGAGCTAAACATGAGCAGTTCTCAATCGGATGACTTGTCACCACATAGCCAGAGTAGTTTTCATTCCTTTGCCAGAGAGTTTGCTGGGACCCGGAACTGTGACACCAAAGTTGCTTCTGGTTCAATTCTGCTATTTGGTAAGATCATACAGCCTGCTGAAAGTGATTTGCATGATGGTGATTGCATGGAACGTGATGGCAGCAGGGGCAGCAATAAACTTAAGACAGTTGAGGCATGCTATTTTTCAAAGTAGTTATGCAGCAGAATGCAGTTAAATACTTGTACAGGAAATCAAGGCTGGCAGGTAAAACAGGAAGCTGTCTAGGGCTTGTAGTGGTAAAGTGATGTTTCCGGGTCATCATATGTTGGTCTTACTACAAACTTGAATGATGAACTAACATCATGATATTTGATCAGTTGTATGATATTAATATCTGACATATTATTGTGTATATTTTCAAATACATTCTTAAAAGGCAATTGTACTTGCCTTTTAAAAAAAATGCCCATGCTTGCGCAGGTAACAACCTCCGTACTCGTATATCTTTATTTGATGAGGTAATTGTAGCCTGAAAGAATGCTTGCAATACTCTTTAACTCTGTCTAGCATGGTTGCTGCGTAGCACATACTTCATGGTATGTTGAGGC
Coding sequences of Glyma14g33730
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma14g33730.1 sequence type=CDS gene model=Glyma14g33730 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGTCTCCGCCGCAGCCCCGCCGCGTCGACCCCAAAATCTGGCGGGCATGCGCCGGCGCCGCCGTGCAAATCCCCAAGCTCCATTCTAGGGTTTACTACTTCCCCCAGGGCCACCTGGAGCACGCCTCTCCCTCGCATTACCTCAACCCTCTCCTCCGCTCTCTTCCCTTCGTCCCCTGCCACGTGTCCTCCCTCGATTTCCTCGCCGATCCTTTCTCCGACGAGGTCTTCGCTAAGTTCCTCCTCACGCCCCTCTCGCAACAACCTTTTCCAAACGACACCACGGAGGCTCGAAACGAAGAAGAGAAGGACCGCGAGAACGGCGTCGTTTCGTTCTCGAAGATCCTGACTCCCTCCGACGCCAACAACGGCGGCGGCTTCTCCGTGCCGCGCTACTTGGCGCTTCGCCACATTTACCGCGGCACGCCGCGCCGCCACCTCTTCACCACCGGCTGGAGCAAGTTCGTCAACCACAAAAAGCTCGTCGCCGGCGACACCGTCGTCTTCGTCAAGGACTCCGACGGCAGGGTCTCCGTCGGAATCCGCCGCGCGGCTCGGTTTGCCGCCGCGATCGAGACTCCGCAGCCGCCACCTGCGGAACGGGAGGGGTTTTCGCGGTCCGCGACGGGGAGAGTGACCGCGGAGGCCGTGGCGGCCGCTGCGGAGTCCGCGGCGCGAAACGCTCCGTTCGAGGTGGTGTATTATCCGAGGACCGGTTTTGCGGATTTTGTGGTGAGTGCTGAGGTTGTGGAGGAATCGATGAAGTGCGCGTGGGTTGGTGGAATGAGAGTGAAGATTGCAATGGAGACTGAGGATTCTTCTAGAATGACGTGGTTTCAAGGGACGGTTTCTTCTGCATGTGCTTCTGAGAATGGACCTTGGCGCATGCTTCAGGTTAATTGGGATGAACCTGAAGTCTTGCAGAATGCAAAGCGAGTCAGTCCTTGGCAGGTTGAACTTGTTTCCCTTCCATTTGCACTTCATACAGTATACTCCCCTAACAAAAGGCTTAGATCTGACCAGGGTTCTGGGCTGTTAAGTAATAGGGAGGGAGACCCCTTCTTTCCTATGACAGGGTTCCCTAACTCGACAATGGAACACATGACAGGGTTCCCTAACTCGACAGTGGGACACATGGATAAATCATTGTTGAGTTATGATACTTTTCCTGCTGGCATGCAGGGAGCCAGGCATGATCTATTTTCTCCATCAAGTTTTTCCAACTTTTTAAATGATAAGTCCTATCTGTATATGGGTAGTGGTTCATTTGGGAACAATCCAGTGCAAAGTTTGGGAACTGTGACAACAGAGCTAAACATGAGCAGTTCTCAATCGGATGACTTGTCACCACATAGCCAGAGTAGTTTTCATTCCTTTGCCAGAGAGTTTGCTGGGACCCGGAACTGTGACACCAAAGTTGCTTCTGGTTCAATTCTGCTATTTGGTAAGATCATACAGCCTGCTGAAAGTGATTTGCATGATGGTGATTGCATGGAACGTGATGGCAGCAGGGGCAGCAATAAACTTAAGACAGTTGAGGCATGCTATTTTTCAAAGTAG
>Glyma14g33730.2 sequence type=CDS gene model=Glyma14g33730 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGTCTCCGCCGCAGCCCCGCCGCGTCGACCCCAAAATCTGGCGGGCATGCGCCGGCGCCGCCGTGCAAATCCCCAAGCTCCATTCTAGGGTTTACTACTTCCCCCAGGGCCACCTGGAGCACGCCTCTCCCTCGCATTACCTCAACCCTCTCCTCCGCTCTCTTCCCTTCGTCCCCTGCCACGTGTCCTCCCTCGATTTCCTCGCCGATCCTTTCTCCGACGAGGTCTTCGCTAAGTTCCTCCTCACGCCCCTCTCGCAACAACCTTTTCCAAACGACACCACGGAGGCTCGAAACGAAGAAGAGAAGGACCGCGAGAACGGCGTCGTTTCGTTCTCGAAGATCCTGACTCCCTCCGACGCCAACAACGGCGGCGGCTTCTCCGTGCCGCGCTACTTGGCGCTTCGCCACATTTACCGCGGCACGCCGCGCCGCCACCTCTTCACCACCGGCTGGAGCAAGTTCGTCAACCACAAAAAGCTCGTCGCCGGCGACACCGTCGTCTTCGTCAAGGACTCCGACGGCAGGGTCTCCGTCGGAATCCGCCGCGCGGCTCGGTTTGCCGCCGCGATCGAGACTCCGCAGCCGCCACCTGCGGAACGGGAGGGGTTTTCGCGGTCCGCGACGGGGAGAGTGACCGCGGAGGCCGTGGCGGCCGCTGCGGAGTCCGCGGCGCGAAACGCTCCGTTCGAGGTGGTGTATTATCCGAGGACCGGTTTTGCGGATTTTGTGGTGAGTGCTGAGGTTGTGGAGGAATCGATGAAGTGCGCGTGGGTTGGTGGAATGAGAGTGAAGATTGCAATGGAGACTGAGGATTCTTCTAGAATGACGTGGTTTCAAGGGACGGTTTCTTCTGCATGTGCTTCTGAGAATGGACCTTGGCGCATGCTTCAGGTTAATTGGGATGAACCTGAAGTCTTGCAGAATGCAAAGCGAGTCAGTCCTTGGCAGGGAGCCAGGCATGATCTATTTTCTCCATCAAGTTTTTCCAACTTTTTAAATGATAAGTCCTATCTGTATATGGGTAGTGGTTCATTTGGGAACAATCCAGTGCAAAGTTTGGGAACTGTGACAACAGAGCTAAACATGAGCAGTTCTCAATCGGATGACTTGTCACCACATAGCCAGAGTAGTTTTCATTCCTTTGCCAGAGAGTTTGCTGGGACCCGGAACTGTGACACCAAAGTTGCTTCTGGTTCAATTCTGCTATTTGGTAAGATCATACAGCCTGCTGAAAGTGATTTGCATGATGGTGATTGCATGGAACGTGATGGCAGCAGGGGCAGCAATAAACTTAAGACAGTTGAGGCATGCTATTTTTCAAAGTAG
Predicted protein sequences of Glyma14g33730
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma14g33730.1 sequence type=predicted peptide gene model=Glyma14g33730 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MSPPQPRRVDPKIWRACAGAAVQIPKLHSRVYYFPQGHLEHASPSHYLNPLLRSLPFVPCHVSSLDFLADPFSDEVFAKFLLTPLSQQPFPNDTTEARNEEEKDRENGVVSFSKILTPSDANNGGGFSVPRYLALRHIYRGTPRRHLFTTGWSKFVNHKKLVAGDTVVFVKDSDGRVSVGIRRAARFAAAIETPQPPPAEREGFSRSATGRVTAEAVAAAAESAARNAPFEVVYYPRTGFADFVVSAEVVEESMKCAWVGGMRVKIAMETEDSSRMTWFQGTVSSACASENGPWRMLQVNWDEPEVLQNAKRVSPWQVELVSLPFALHTVYSPNKRLRSDQGSGLLSNREGDPFFPMTGFPNSTMEHMTGFPNSTVGHMDKSLLSYDTFPAGMQGARHDLFSPSSFSNFLNDKSYLYMGSGSFGNNPVQSLGTVTTELNMSSSQSDDLSPHSQSSFHSFAREFAGTRNCDTKVASGSILLFGKIIQPAESDLHDGDCMERDGSRGSNKLKTVEACYFSK*
>Glyma14g33730.2 sequence type=predicted peptide gene model=Glyma14g33730 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MSPPQPRRVDPKIWRACAGAAVQIPKLHSRVYYFPQGHLEHASPSHYLNPLLRSLPFVPCHVSSLDFLADPFSDEVFAKFLLTPLSQQPFPNDTTEARNEEEKDRENGVVSFSKILTPSDANNGGGFSVPRYLALRHIYRGTPRRHLFTTGWSKFVNHKKLVAGDTVVFVKDSDGRVSVGIRRAARFAAAIETPQPPPAEREGFSRSATGRVTAEAVAAAAESAARNAPFEVVYYPRTGFADFVVSAEVVEESMKCAWVGGMRVKIAMETEDSSRMTWFQGTVSSACASENGPWRMLQVNWDEPEVLQNAKRVSPWQGARHDLFSPSSFSNFLNDKSYLYMGSGSFGNNPVQSLGTVTTELNMSSSQSDDLSPHSQSSFHSFAREFAGTRNCDTKVASGSILLFGKIIQPAESDLHDGDCMERDGSRGSNKLKTVEACYFSK*