Glyma14g32900 - SoyBase

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Report for Sequence Feature Glyma14g32900

Feature Type:	gene_model
Chromosome:	Gm14
Start:	40041812
stop:	40049155
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g32900

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G53050	AT	Annotation by Michelle Graham. TAIR10: alpha/beta-Hydrolases superfamily protein \| chr5:21510534-21513432 REVERSE LENGTH=396	SoyBase	E_val: 9.00E-177	ISS
GO:0005737	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm	SoyBase	N/A	ISS
GO:0003824	GO-mf	Annotation by Michelle Graham. GO Molecular Function: catalytic activity	SoyBase	N/A	ISS
GO:0016787	GO-mf	Annotation by Michelle Graham. GO Molecular Function: hydrolase activity	SoyBase	N/A	ISS
KOG4178	KOG	Soluble epoxide hydrolase	JGI		ISS
PTHR10992	Panther	ALPHA/BETA HYDROLASE RELATED	JGI		ISS
PTHR10992:SF11	Panther	UNCHARACTERIZED	JGI		ISS
PF00561	PFAM	alpha/beta hydrolase fold	JGI		ISS
UniRef100_B9S7G4	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Carboxylesterase np, putative n=1 Tax=Ricinus communis RepID=B9S7G4_RICCO	SoyBase	E_val: 0	ISS
UniRef100_I1MAK4	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MAK4_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma14g32900

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g32900 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g162400	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma14g32900

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma14g32900

Limit To All Plant Sequences

>Glyma14g32900.1   sequence type=CDS   gene model=Glyma14g32900   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCCGTTTTGCAACGTCGGAACGCAGCTACCCTCCCCCGTCGCCGACGTGCCCCTCAACAATGACATCAAGATATTCTACAGAACTTACGGTGGCGGTCCAACCAAAGTGCTCCTCATCATAGGATTGGCCGCGACGCACGAAGCGTGGGGCCCACAAATCAAGGGCTTGACTGGAGCAACCGTCCCCGACGACGTCGTTTGGAGCGAAGAAGAAGGCAATGGTGGCATCCATGTATGCGCGTTTGACAATCGCGGCGTCGGTCGCAGCTCCGTGCCTGTCGAAAAATCTGAATTCTCAACCAAGATCATGGCGAAGGATGCAATTGCTTTGTTAGATCATCTAGGTTGGAAAAAAGCCCATGTTTTTGGGCACTCGATGGGAGCCATGATAGCTTGTAAAGTAGCAGCAATGGTTCCTGATCGAGTCCTTTCCTTGGCATTGCTCAACGTGACGGGTGGAGGTTTTCAATGTTTTCCAAAGTTGGACCAACAAACGATCTCTGTTGCTTACCGATTCTTGAAAGCAAAGACACCTGAACAAAGGGCTGCTGTTGACTTGGACACCCATTACTCTCAAGAATATCTTGAGGAATACGTTGGAACAGATAAGAGGAGAGCCATCTTATATCAGCAATATGTTAAAGGTATATCAACAACTGGGATGCAATCTAACTATGGTTTCGATGGTCAACTCAATGCATGTTGGGCACATAAAATGACTGAAACAGAGATTGAGGTGATCAAATCTGCAGGCTTTCTTGTTTCAGTCATCCATGGCAGGCATGATATAATTGCTCAGATATATTATGCAAAAAGACTTGCTGAGAAGCTTCATCCAGTGGCTAGAATGGTAGATCTTCATGGAGGTCATTTAGTAAGTCATGAGCGGTCTGAAGAGGTTAATCAAGCACTATTTGACTTGATCAAGGCATCAAAAGTGAATATGAGCCCACATGATTGGACTAATTTGCCAAAGAAAGAGTCTTGGTGGAAAGAGAAAAGGGTTTTGATCAGAACAAACATTCAGGCCGGAAGCAATGTCTCCCTTAACTGCTGCATGTTAGAAAAACTGCATCTCTTCCTATTATACCTCTTTGGTCTTCTTGTTTTAGCATTTGAATATGGAAGAAAGCTTCTAGGAAGCTTAAAACCAGCTCAAGCTGGAGGTTCCCCCTCATATATTGAAAGTCAATAA

Predicted protein sequences of Glyma14g32900

Limit To All Plant Sequences

>Glyma14g32900.1   sequence type=predicted peptide   gene model=Glyma14g32900   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MPFCNVGTQLPSPVADVPLNNDIKIFYRTYGGGPTKVLLIIGLAATHEAWGPQIKGLTGATVPDDVVWSEEEGNGGIHVCAFDNRGVGRSSVPVEKSEFSTKIMAKDAIALLDHLGWKKAHVFGHSMGAMIACKVAAMVPDRVLSLALLNVTGGGFQCFPKLDQQTISVAYRFLKAKTPEQRAAVDLDTHYSQEYLEEYVGTDKRRAILYQQYVKGISTTGMQSNYGFDGQLNACWAHKMTETEIEVIKSAGFLVSVIHGRHDIIAQIYYAKRLAEKLHPVARMVDLHGGHLVSHERSEEVNQALFDLIKASKVNMSPHDWTNLPKKESWWKEKRVLIRTNIQAGSNVSLNCCMLEKLHLFLLYLFGLLVLAFEYGRKLLGSLKPAQAGGSPSYIESQ*

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