SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research



Report for Sequence Feature Glyma14g32900

Feature Type:gene_model
Chromosome:Gm14
Start:40041812
stop:40049155
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G53050AT Annotation by Michelle Graham. TAIR10: alpha/beta-Hydrolases superfamily protein | chr5:21510534-21513432 REVERSE LENGTH=396 SoyBaseE_val: 9.00E-177ISS
GO:0005737GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm SoyBaseN/AISS
GO:0003824GO-mf Annotation by Michelle Graham. GO Molecular Function: catalytic activity SoyBaseN/AISS
GO:0016787GO-mf Annotation by Michelle Graham. GO Molecular Function: hydrolase activity SoyBaseN/AISS
KOG4178 KOG Soluble epoxide hydrolase JGI ISS
PTHR10992Panther ALPHA/BETA HYDROLASE RELATED JGI ISS
PTHR10992:SF11Panther UNCHARACTERIZED JGI ISS
PF00561PFAM alpha/beta hydrolase fold JGI ISS
UniRef100_B9S7G4UniRef Annotation by Michelle Graham. Most informative UniRef hit: Carboxylesterase np, putative n=1 Tax=Ricinus communis RepID=B9S7G4_RICCO SoyBaseE_val: 0ISS
UniRef100_I1MAK4UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MAK4_SOYBN SoyBaseE_val: 0ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments
Glyma.14g162400 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma14g32900.1   sequence type=CDS   gene model=Glyma14g32900   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCCGTTTTGCAACGTCGGAACGCAGCTACCCTCCCCCGTCGCCGACGTGCCCCTCAACAATGACATCAAGATATTCTACAGAACTTACGGTGGCGGTCCAACCAAAGTGCTCCTCATCATAGGATTGGCCGCGACGCACGAAGCGTGGGGCCCACAAATCAAGGGCTTGACTGGAGCAACCGTCCCCGACGACGTCGTTTGGAGCGAAGAAGAAGGCAATGGTGGCATCCATGTATGCGCGTTTGACAATCGCGGCGTCGGTCGCAGCTCCGTGCCTGTCGAAAAATCTGAATTCTCAACCAAGATCATGGCGAAGGATGCAATTGCTTTGTTAGATCATCTAGGTTGGAAAAAAGCCCATGTTTTTGGGCACTCGATGGGAGCCATGATAGCTTGTAAAGTAGCAGCAATGGTTCCTGATCGAGTCCTTTCCTTGGCATTGCTCAACGTGACGGGTGGAGGTTTTCAATGTTTTCCAAAGTTGGACCAACAAACGATCTCTGTTGCTTACCGATTCTTGAAAGCAAAGACACCTGAACAAAGGGCTGCTGTTGACTTGGACACCCATTACTCTCAAGAATATCTTGAGGAATACGTTGGAACAGATAAGAGGAGAGCCATCTTATATCAGCAATATGTTAAAGGTATATCAACAACTGGGATGCAATCTAACTATGGTTTCGATGGTCAACTCAATGCATGTTGGGCACATAAAATGACTGAAACAGAGATTGAGGTGATCAAATCTGCAGGCTTTCTTGTTTCAGTCATCCATGGCAGGCATGATATAATTGCTCAGATATATTATGCAAAAAGACTTGCTGAGAAGCTTCATCCAGTGGCTAGAATGGTAGATCTTCATGGAGGTCATTTAGTAAGTCATGAGCGGTCTGAAGAGGTTAATCAAGCACTATTTGACTTGATCAAGGCATCAAAAGTGAATATGAGCCCACATGATTGGACTAATTTGCCAAAGAAAGAGTCTTGGTGGAAAGAGAAAAGGGTTTTGATCAGAACAAACATTCAGGCCGGAAGCAATGTCTCCCTTAACTGCTGCATGTTAGAAAAACTGCATCTCTTCCTATTATACCTCTTTGGTCTTCTTGTTTTAGCATTTGAATATGGAAGAAAGCTTCTAGGAAGCTTAAAACCAGCTCAAGCTGGAGGTTCCCCCTCATATATTGAAAGTCAATAA

>Glyma14g32900.1   sequence type=predicted peptide   gene model=Glyma14g32900   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MPFCNVGTQLPSPVADVPLNNDIKIFYRTYGGGPTKVLLIIGLAATHEAWGPQIKGLTGATVPDDVVWSEEEGNGGIHVCAFDNRGVGRSSVPVEKSEFSTKIMAKDAIALLDHLGWKKAHVFGHSMGAMIACKVAAMVPDRVLSLALLNVTGGGFQCFPKLDQQTISVAYRFLKAKTPEQRAAVDLDTHYSQEYLEEYVGTDKRRAILYQQYVKGISTTGMQSNYGFDGQLNACWAHKMTETEIEVIKSAGFLVSVIHGRHDIIAQIYYAKRLAEKLHPVARMVDLHGGHLVSHERSEEVNQALFDLIKASKVNMSPHDWTNLPKKESWWKEKRVLIRTNIQAGSNVSLNCCMLEKLHLFLLYLFGLLVLAFEYGRKLLGSLKPAQAGGSPSYIESQ*







Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo