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Report for Sequence Feature Glyma14g32190

Feature Type:gene_model
Chromosome:Gm14
Start:39322658
stop:39324679
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G24400AT Annotation by Michelle Graham. TAIR10: NagB/RpiA/CoA transferase-like superfamily protein | chr5:8330532-8331784 REVERSE LENGTH=325 SoyBaseE_val: 3.00E-96ISS
GO:0002229GO-bp Annotation by Michelle Graham. GO Biological Process: defense response to oomycetes SoyBaseN/AISS
GO:0005975GO-bp Annotation by Michelle Graham. GO Biological Process: carbohydrate metabolic process SoyBaseN/AISS
GO:0006098GO-bp Annotation by Michelle Graham. GO Biological Process: pentose-phosphate shunt SoyBaseN/AISS
GO:0009793GO-bp Annotation by Michelle Graham. GO Biological Process: embryo development ending in seed dormancy SoyBaseN/AISS
GO:0042742GO-bp Annotation by Michelle Graham. GO Biological Process: defense response to bacterium SoyBaseN/AISS
GO:0071461GO-bp Annotation by Michelle Graham. GO Biological Process: cellular response to redox state SoyBaseN/AISS
GO:0005777GO-cc Annotation by Michelle Graham. GO Cellular Compartment: peroxisome SoyBaseN/AISS
GO:0009507GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast SoyBaseN/AISS
GO:0009570GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast stroma SoyBaseN/AISS
GO:0003824GO-mf Annotation by Michelle Graham. GO Molecular Function: catalytic activity SoyBaseN/AISS
GO:0017057GO-mf Annotation by Michelle Graham. GO Molecular Function: 6-phosphogluconolactonase activity SoyBaseN/AISS
KOG3147 KOG 6-phosphogluconolactonase - like protein JGI ISS
PTHR11054Panther 6-PHOSPHOGLUCONOLACTONASE JGI ISS
PF01182PFAM Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JGI ISS
UniRef100_G7J870UniRef Annotation by Michelle Graham. Most informative UniRef hit: 6-phosphogluconolactonase n=1 Tax=Medicago truncatula RepID=G7J870_MEDTR SoyBaseE_val: 5.00E-121ISS
UniRef100_I1MAJ4UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MAJ4_SOYBN SoyBaseE_val: 0ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments
Glyma.14g161800 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma14g32190.1   sequence type=CDS   gene model=Glyma14g32190   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCCACTTCCACAATTTTCTCCCTGTCATGCACTCCCAAAAGCACATTGCTTTCCAAACCAAAGCAACACACACTATCCCCTTCCATGTCATTGCTGTCACCGGAAGTGGTACAAAAAAGCCTCTACCAGCCTCTAAGAAACAATGTATCTCCAATTTCTATGAAGCCTAAGAGAAATCATGTGGGTGGCTTAGTGAAGGCATCAATGAATAACAAGAACGTGGAGGTATTCTCCAAGGAACATCTTGCTGTGTCTCTGGCCAAATATGTTGCTGATCTATCCAATAAATTCATCAAAGAAAGAGGATACTTCGCTATCGCTCTTTCCGCTGGGTCTATCAAGTACCTCAGGAAGCTAGTGGAACCTCACTATTCTAACACTATCCAATGGTCTAAGTGGCATATATTTTGGGTAGATGAGAAAGTGGTGCCAAAGACTCACGTGGATAGCAACTACAAGCTTGCTTACGATGGATTTATCTCCAAGGTGCCAATTCCTCCATACAATGTCAACACAATTGATGATGCCTTGCCAGCTGATGGAGCAGCTGATGTTTATGAGACAACTCTCAAACGCTTGGTTGCAAGTAATGTGGTCGCAAAATCACTAGCCACAGGATTTCCAAAATTTGATCTTGTGTTGTTAGACATGGGTCCTGATGGGCATGTGGCATCTCTGTTCCCAGAGCACCCTACACTGAATGAGACCAAAAAATGGGTTACCTTTCTCAAGAATGCACCCACCGCACCACCAGAGAGGATCACCTTTACCTTGCCAGTGATCAATGCTTCTTCAAACATAGCAATGGTGGTGACTGGTGCTGGTAAAGCAGATGCAGTCTACTCTGCACTGGAGGAAGCTCCTAGTGATTATAAGCTCCCTGCTCAATTGGTTTCACCTAGAGAAGGAGAGTTGAAATGGTTCTTAGACAAGGGAGCTGCATCAAGGTTATGGTAG

>Glyma14g32190.1   sequence type=predicted peptide   gene model=Glyma14g32190   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MATSTIFSLSCTPKSTLLSKPKQHTLSPSMSLLSPEVVQKSLYQPLRNNVSPISMKPKRNHVGGLVKASMNNKNVEVFSKEHLAVSLAKYVADLSNKFIKERGYFAIALSAGSIKYLRKLVEPHYSNTIQWSKWHIFWVDEKVVPKTHVDSNYKLAYDGFISKVPIPPYNVNTIDDALPADGAADVYETTLKRLVASNVVAKSLATGFPKFDLVLLDMGPDGHVASLFPEHPTLNETKKWVTFLKNAPTAPPERITFTLPVINASSNIAMVVTGAGKADAVYSALEEAPSDYKLPAQLVSPREGELKWFLDKGAASRLW*







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