Glyma14g32106 - SoyBase

SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma14g32106

Feature Type:	gene_model
Chromosome:	Gm14
Start:	39196794
stop:	39197753
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g32106

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G07050	AT	Annotation by Michelle Graham. TAIR10: nodulin MtN21 /EamA-like transporter family protein \| chr5:2191533-2193416 REVERSE LENGTH=402	SoyBase	E_val: 2.00E-33	ISS
GO:0009507	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: chloroplast	SoyBase	N/A	ISS
GO:0016020	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: membrane	SoyBase	N/A	ISS
UniRef100_B9SHS8	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Auxin-induced protein 5NG4, putative n=1 Tax=Ricinus communis RepID=B9SHS8_RICCO	SoyBase	E_val: 3.00E-33	ISS
UniRef100_I1MAJ3	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MAJ3_SOYBN	SoyBase	E_val: 6.00E-83	ISS

Expression Patterns of Glyma14g32106

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g32106 not represented in the dataset	Glyma14g32106 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g32106 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g161700	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma14g32106

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma14g32106

Limit To All Plant Sequences

>Glyma14g32106.2   sequence type=transcript   gene model=Glyma14g32106   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AATTGCAGTTACCTTTGTCATGGAGCACAAACCATTTGTTTCGACCATTGGCTGGGACATGAACCTTCTTGCTGCTGCCTATGCTGGAATAATATCATCAGGTATCACCTACTATGTTCAAGGGATTGTCATGCAGAAAAAGGGCCTGTTTTTGTTACTGCTTTCAACCCTTTGATGATGATTATTGTAGCCATCATGGGTGCCTTCATCCTTGCAAAAAAAATATATCTTGGAGGGGTCATTGGAGCTATTCTCATAGTAATGGGACTTTACTCAGTTCTGTGGGGCAAGCACAAGGAGAACAAAGAGAAAGAGGCAGAGATAACTATTGAGGTATTGAAGTGTTGTTTAGAAAATGGGATGACGTTGGAGACTATGGTAAAAGATGTCGAAACAAACAATGACATTGACATGCAAAAGGGTGAAGCCTCAAGAGAGTTAAGGGTAGCCATTGTTGTTCCAAAAGTTTAAAGTGGTTAAGATTAGAAAGGAAAGGGATGAATAATAATAGAGGCTGCAATGAAAAAAAGGGTCTTTAATTGAAAGCA

Coding sequences of Glyma14g32106

Limit To All Plant Sequences

>Glyma14g32106.1   sequence type=CDS   gene model=Glyma14g32106   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAGCACAAACCATTTGTTTCGACCATTGGCTGGGACATGAACCTTCTTGCTGCTGCCTATGCTGTAATCCACTTTCTCTCTATTTGGCCTGTTTTTGTTACTGCTTTCAACCCTTTGATGATGATTATTGTAGCCATCATGGGTGCCTTCATCCTTGCAAAAAAAATATATCTTGGAGGGGTCATTGGAGCTATTCTCATAGTAATGGGACTTTACTCAGTTCTGTGGGGCAAGCACAAGGAGAACAAAGAGAAAGAGGCAGAGATAACTATTGAGGTATTGAAGTGTTGTTTAGAAAATGGGATGACGTTGGAGACTATGGTAAAAGATGTCGAAACAAACAATGACATTGACATGCAAAAGGGTGAAGCCTCAAGAGAGTTAAGGGTAGCCATTGTTGTTCCAAAAGTTTAA

>Glyma14g32106.2   sequence type=CDS   gene model=Glyma14g32106   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGATGATTATTGTAGCCATCATGGGTGCCTTCATCCTTGCAAAAAAAATATATCTTGGAGGGGTCATTGGAGCTATTCTCATAGTAATGGGACTTTACTCAGTTCTGTGGGGCAAGCACAAGGAGAACAAAGAGAAAGAGGCAGAGATAACTATTGAGGTATTGAAGTGTTGTTTAGAAAATGGGATGACGTTGGAGACTATGGTAAAAGATGTCGAAACAAACAATGACATTGACATGCAAAAGGGTGAAGCCTCAAGAGAGTTAAGGGTAGCCATTGTTGTTCCAAAAGTTTAA

Predicted protein sequences of Glyma14g32106

Limit To All Plant Sequences

>Glyma14g32106.1   sequence type=predicted peptide   gene model=Glyma14g32106   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MEHKPFVSTIGWDMNLLAAAYAVIHFLSIWPVFVTAFNPLMMIIVAIMGAFILAKKIYLGGVIGAILIVMGLYSVLWGKHKENKEKEAEITIEVLKCCLENGMTLETMVKDVETNNDIDMQKGEASRELRVAIVVPKV*

>Glyma14g32106.2   sequence type=predicted peptide   gene model=Glyma14g32106   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MMIIVAIMGAFILAKKIYLGGVIGAILIVMGLYSVLWGKHKENKEKEAEITIEVLKCCLENGMTLETMVKDVETNNDIDMQKGEASRELRVAIVVPKV*

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

U.S. Public Domain