|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G41480 | AT | Annotation by Michelle Graham. TAIR10: Folylpolyglutamate synthetase family protein | chr5:16595967-16598523 FORWARD LENGTH=530 | SoyBase | E_val: 0 | ISS |
GO:0006730 | GO-bp | Annotation by Michelle Graham. GO Biological Process: one-carbon metabolic process | SoyBase | N/A | ISS |
GO:0009058 | GO-bp | Annotation by Michelle Graham. GO Biological Process: biosynthetic process | SoyBase | N/A | ISS |
GO:0009396 | GO-bp | Annotation by Michelle Graham. GO Biological Process: folic acid-containing compound biosynthetic process | SoyBase | N/A | ISS |
GO:0009793 | GO-bp | Annotation by Michelle Graham. GO Biological Process: embryo development ending in seed dormancy | SoyBase | N/A | ISS |
GO:0005759 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: mitochondrial matrix | SoyBase | N/A | ISS |
GO:0004326 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: tetrahydrofolylpolyglutamate synthase activity | SoyBase | N/A | ISS |
GO:0005524 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ATP binding | SoyBase | N/A | ISS |
GO:0008841 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: dihydrofolate synthase activity | SoyBase | N/A | ISS |
GO:0016874 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ligase activity | SoyBase | N/A | ISS |
KOG2525 | KOG | Folylpolyglutamate synthase | JGI | ISS | |
PTHR11136 | Panther | FOLYLPOLYGLUTAMATE SYNTHASE-RELATED | JGI | ISS | |
PF08245 | PFAM | Mur ligase middle domain | JGI | ISS | |
UniRef100_G7L1S8 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Folylpolyglutamate synthase n=1 Tax=Medicago truncatula RepID=G7L1S8_MEDTR | SoyBase | E_val: 0 | ISS |
UniRef100_UPI000233B836 | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI000233B836 related cluster n=1 Tax=unknown RepID=UPI000233B836 | SoyBase | E_val: 0 | ISS |
Glyma14g31620 not represented in the dataset |
Glyma14g31620 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.14g160900 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma14g31620.2 sequence type=CDS gene model=Glyma14g31620 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGAAAGACTTTCTGGATTACCTCGACTCCCTCAAAAATTACGAGAAATCAGGAGTTCCCAAAGGTGCCGGCACCGATTCCAGCGACGGTTTCGATCTTGGTAGAATGAGATGCCTCATGGAGCGTTTTGGTAACCCTCACTCCAAGTTCAAGGCTGTTCATATTGCTGGAACTAAGGGGAAGGCATCAACAGCTGCTTTTGTATCTAATATTCTGAGGAATGAAGGTTATTCTGTTGGTTGTTACACTAGTCCACATATCCTGACCATCCGGGAGCGCATTTTACTGGGAAAATCCGGCCATCTGGTGTCAGCGAAATTGTTGAATGATCTCTTTCGTAGGATCAAGCCCGATATTGACCAGGCAATGAAAGAGGAAAATGGTTGCATAAGCCATTTTGAGGTTTTCACTACCATGGCATTCCTCCTATTTGCTGATGAGAATGTTGACTTTGCTGTTATTGAGGCTGGGTTAGGGGGTGCACGAGATGCAACAAATATAATATCCAGCTCTGGGCTTGTTGCATCAGTCATAACCACTGTAGGTGAAGAACATTTGGCAGCTCTTGGGGGTTCTTTGGAAACAATTGCAATGGCAAAGGCAGGAATCATAAAACAAGACCGCCCATTGGTGTTGGGTGGTCCATTTGTCCCTCATATTGAGCGCATTATTCGAGACAAAGCAGTAGCCATGAATTCACCTGTAGTGTCAGCATACGATACTGGAAATAAGTGTACTATGAAAAGTTTCAGCATACTCAATGGAAGGCCTTGTCAAATTTGTGATATACTGATACAAGTTGTGAAAGACATGAAAATGTCCTATCACCAACTTCAAAATGCAGCTACTGCTACTTGTGTGGCACTTGTTCTTCGCAATTTAGGATGGAGTATTTCTGATAAATCTATTAGGTATGGTTTAGAGGATACATACCTTCTTGGAAGGAGTCAATTTCTAACATCTGAAGAAGCTGAGGTATTAGGACTTACTGGATCAACAGTACTGCTTGATGGAGCCCACACCAAAGAATCTGCCAAAGCTCTGATGAATACCATAAGGATGGCATTTCCCAAGGCTCAATTGGTTTTTGTTGTTGCAATGGCAAGTGACAAAGATCATGTGGGATTTGCTCGAGAGATTCTCTCAGGTGTACATGTGGAGACTGTCGTTTTGACAGAAGCTGCTATTGCTGGAGGTGTAACTCGAACAACACCAGCATCTTTGTTGAGAGATTCTTGGATTAAAGCTTCTGGTGAGCTTGGCATTGGTATTGTTCATGATGGAATGGCAGAATACAGTGAATTATTAAAGGAACAACCAGTAGGCTCTGAAAGCAATTTGGGTGATGGTAAGACCGTGTTGGCTACTGAGTCATGTTTAAAGGGTTGTTTGAGAACCGCAAATCAGATTCTAAGCAGACGAGGGGATGAAAAGCGTGTTATTGTCTTCACCGGGTCTCTGCATATTGCAGCTTCAGTCTTAGCTTCTCTTGCTGGTTAA
>Glyma14g31620.2 sequence type=predicted peptide gene model=Glyma14g31620 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MKDFLDYLDSLKNYEKSGVPKGAGTDSSDGFDLGRMRCLMERFGNPHSKFKAVHIAGTKGKASTAAFVSNILRNEGYSVGCYTSPHILTIRERILLGKSGHLVSAKLLNDLFRRIKPDIDQAMKEENGCISHFEVFTTMAFLLFADENVDFAVIEAGLGGARDATNIISSSGLVASVITTVGEEHLAALGGSLETIAMAKAGIIKQDRPLVLGGPFVPHIERIIRDKAVAMNSPVVSAYDTGNKCTMKSFSILNGRPCQICDILIQVVKDMKMSYHQLQNAATATCVALVLRNLGWSISDKSIRYGLEDTYLLGRSQFLTSEEAEVLGLTGSTVLLDGAHTKESAKALMNTIRMAFPKAQLVFVVAMASDKDHVGFAREILSGVHVETVVLTEAAIAGGVTRTTPASLLRDSWIKASGELGIGIVHDGMAEYSELLKEQPVGSESNLGDGKTVLATESCLKGCLRTANQILSRRGDEKRVIVFTGSLHIAASVLASLAG*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||