Glyma14g30940 - SoyBase

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Report for Sequence Feature Glyma14g30940

Feature Type:	gene_model
Chromosome:	Gm14
Start:	37715242
stop:	37718176
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g30940

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G53190	AT	Annotation by Michelle Graham. TAIR10: Nodulin MtN3 family protein \| chr5:21572417-21574284 REVERSE LENGTH=263	SoyBase	E_val: 1.00E-98	ISS
GO:0008150	GO-bp	Annotation by Michelle Graham. GO Biological Process: biological process	SoyBase	N/A	ISS
GO:0005886	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane	SoyBase	N/A	ISS
GO:0005887	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: integral to plasma membrane	SoyBase	N/A	ISS
GO:0016020	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: membrane	SoyBase	N/A	ISS
GO:0016021	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane	SoyBase	N/A	ISS
GO:0051119	GO-mf	Annotation by Michelle Graham. GO Molecular Function: sugar transmembrane transporter activity	SoyBase	N/A	ISS
KOG1623	KOG	Multitransmembrane protein	JGI		ISS
PTHR10791	Panther	STROMAL CELL PROTEIN/NODULIN MTN3-RELATED	JGI		ISS
PF03083	PFAM	MtN3/saliva family	JGI		ISS
UniRef100_G7J6S0	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Protein RUPTURED POLLEN GRAIN n=1 Tax=Medicago truncatula RepID=G7J6S0_MEDTR	SoyBase	E_val: 3.00E-123	ISS
UniRef100_I1MAI3	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MAI3_SOYBN	SoyBase	E_val: 0	ISS

Proteins Associated with Glyma14g30940

Locus	Gene Symbol	Protein Name
	SWEET38	sucrose transporter gene 38
	SWEET38	sucrose effluxer gene 38

Expression Patterns of Glyma14g30940

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g30940 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g160100	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma14g30940

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma14g30940

Limit To All Plant Sequences

>Glyma14g30940.2   sequence type=transcript   gene model=Glyma14g30940   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AATGCCCTCAAAGCCTTATAAATAGAGCATCCTCAAAAGGATCTCTTCATTGGTAGACATAACTTCCCCTTAGTATTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACTCTTACGTGTTACTCTCACTTCACAAAAGAGTAAAGAACTAAACATGGCAGAGACCCTTCGTATGGTTGTTGCTGTTATTGGGAATGTTGCCTCAGTGTCTCTTTATGCTGCACCAACGGTTACCTTCAAAAGGGTCATAAGGAAGAAAAGCACTGAGGAGTTTTCATGCATGCCTTACATCATTGCACTGCTGAACTGTCTTCTTTTCACTTGGTATGGATTGCCAGTAGTAAGCAACAAGTGGGAAAATTTACCTCTTGTCACAGTTAATGGAGTTGGGATTCTTTTTGAGTTATCCTATGTTCTCATTTATATCTGGTTTTCTACACCAAAAGGAAAGGTGAAGGTGGCCATGACAGCAGTACCAGTTCTTATAGTGTTCTGTGTGATTGCTATCGTATCAGCTTTTGTCTTCCCGGATCATCGCCACCGAAAGCTTCTGGTGGGTAGCATAGGCTTGGGGGTGTCAATAGCAATGTATGGATCTCCTTTGGTTGTAATGAAGAAAGTGATACAAACCAAGAGTGTGGAATTCATGCCACTTCCTTTATCTTTCTGCTCATTCTTGGCCAGTGTACTGTGGCTGACTTACGGACTCCTCATTCGAGACATTTTCGTTGCGGTGTGTACCAGCATCACCAATATTTAATTTAAAGATAAAATATGTTTTAAGTAATCTATTTAGGATAAAATTTGATTTTAATTTTTGAACTTCAACTTTAAATAATTTACTACCTAAATTTTATAAAAAAAGTGTAACTTTTGTTTTGTTCCTCCACGCAGTGAAAACCGTGTGATGAGTGACAAAATCACACTATTTTCTAGAAATTTAGAAATCAAATTACTCAAAATTAAAATATGGAGACTAAATATTAATTTTTATTGAAAGTACAGGAAAAAAAACATATTTTACCGTTAATTTGATTAATCATTGATCATATTATTATAAGTTTCACAAATATTAGGATGTTGAGTTGATGCTCCACCTGTGACAGGGACCAAGTCTGATTGGAACACCCTTAGGCATACTCCAACTCGTTCTCCACTGCAAATACTGGAAGAGGAGAGTGATGGAAGAGCCTAACAAGGTGGAATTGCAAAAGGGGAACAACACAGAGAAACTTGACTTGGAAATGGGACATGGAAAAGAATGTGTGACAGTTCCTAGTAACTGCAACTAATGATCCAGGACAGCCTAGATTGAAAGATTTCAACTGGTTCTTCTAGGATTAAGGATTCCGGTTTTAATGTTCGTTTCATTAACCAAAAAAAAAAAAGAAAAAAAAATAATGGTATTAATTAACTTGGTCAATTCAGCTAGTGCACTGGTGGATATATTCACCACACAGATTTAAATCATAGTTGCCTAGTGAATGTCCTGTTACATGCTTTCTTTTCGTGGAAATTGGTTTGTGCCACTTAGTTATGTTTATGAATTTAATCGAATATACTTCGATTTAACAAAGCCATATCTTAATTTATAGAATTTTAATGAGGAGATTTATATTCAA

Coding sequences of Glyma14g30940

Limit To All Plant Sequences

>Glyma14g30940.1   sequence type=CDS   gene model=Glyma14g30940   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCAGAGACCCTTCGTATGGTTGTTGCTGTTATTGGGAATGTTGCCTCAGTGTCTCTTTATGCTGCACCAACGGTTACCTTCAAAAGGGTCATAAGGAAGAAAAGCACTGAGGAGTTTTCATGCATGCCTTACATCATTGCACTGCTGAACTGTCTTCTTTTCACTTGGTATGGATTGCCAGTAGTAAGCAACAAGTGGGAAAATTTACCTCTTGTCACAGTTAATGGAGTTGGGATTCTTTTTGAGTTATCCTATGTTCTCATTTATATCTGGTTTTCTACACCAAAAGGAAAGGTGAAGGTGGCCATGACAGCAGTACCAGTTCTTATAGTGTTCTGTGTGATTGCTATCGTATCAGCTTTTGTCTTCCCGGATCATCGCCACCGAAAGCTTCTGGTGGGTAGCATAGGCTTGGGGGTGTCAATAGCAATGTATGGATCTCCTTTGGTTGTAATGAAGAAAGTGATACAAACCAAGAGTGTGGAATTCATGCCACTTCCTTTATCTTTCTGCTCATTCTTGGCCAGTGTACTGTGGCTGACTTACGGACTCCTCATTCGAGACATTTTCGTTGCGGGACCAAGTCTGATTGGAACACCCTTAGGCATACTCCAACTCGTTCTCCACTGCAAATACTGGAAGAGGAGAGTGATGGAAGAGCCTAACAAGGTGGAATTGCAAAAGGGGAACAACACAGAGAAACTTGACTTGGAAATGGGACATGGAAAAGAATGTGTGACAGTTCCTAGTAACTGCAACTAA

>Glyma14g30940.2   sequence type=CDS   gene model=Glyma14g30940   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCAGAGACCCTTCGTATGGTTGTTGCTGTTATTGGGAATGTTGCCTCAGTGTCTCTTTATGCTGCACCAACGGTTACCTTCAAAAGGGTCATAAGGAAGAAAAGCACTGAGGAGTTTTCATGCATGCCTTACATCATTGCACTGCTGAACTGTCTTCTTTTCACTTGGTATGGATTGCCAGTAGTAAGCAACAAGTGGGAAAATTTACCTCTTGTCACAGTTAATGGAGTTGGGATTCTTTTTGAGTTATCCTATGTTCTCATTTATATCTGGTTTTCTACACCAAAAGGAAAGGTGAAGGTGGCCATGACAGCAGTACCAGTTCTTATAGTGTTCTGTGTGATTGCTATCGTATCAGCTTTTGTCTTCCCGGATCATCGCCACCGAAAGCTTCTGGTGGGTAGCATAGGCTTGGGGGTGTCAATAGCAATGTATGGATCTCCTTTGGTTGTAATGAAGAAAGTGATACAAACCAAGAGTGTGGAATTCATGCCACTTCCTTTATCTTTCTGCTCATTCTTGGCCAGTGTACTGTGGCTGACTTACGGACTCCTCATTCGAGACATTTTCGTTGCGGTGTGTACCAGCATCACCAATATTTAA

Predicted protein sequences of Glyma14g30940

Limit To All Plant Sequences

>Glyma14g30940.1   sequence type=predicted peptide   gene model=Glyma14g30940   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MAETLRMVVAVIGNVASVSLYAAPTVTFKRVIRKKSTEEFSCMPYIIALLNCLLFTWYGLPVVSNKWENLPLVTVNGVGILFELSYVLIYIWFSTPKGKVKVAMTAVPVLIVFCVIAIVSAFVFPDHRHRKLLVGSIGLGVSIAMYGSPLVVMKKVIQTKSVEFMPLPLSFCSFLASVLWLTYGLLIRDIFVAGPSLIGTPLGILQLVLHCKYWKRRVMEEPNKVELQKGNNTEKLDLEMGHGKECVTVPSNCN*

>Glyma14g30940.2   sequence type=predicted peptide   gene model=Glyma14g30940   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MAETLRMVVAVIGNVASVSLYAAPTVTFKRVIRKKSTEEFSCMPYIIALLNCLLFTWYGLPVVSNKWENLPLVTVNGVGILFELSYVLIYIWFSTPKGKVKVAMTAVPVLIVFCVIAIVSAFVFPDHRHRKLLVGSIGLGVSIAMYGSPLVVMKKVIQTKSVEFMPLPLSFCSFLASVLWLTYGLLIRDIFVAVCTSITNI*

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