SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma14g29145

Feature Type:gene_model
Chromosome:Gm14
Start:35918054
stop:35925201
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma14g29145
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G47610AT Annotation by Michelle Graham. TAIR10: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | chr2:19529854-19531401 FORWARD LENGTH=257 SoyBaseE_val: 3.00E-20ISS
GO:0001510GO-bp Annotation by Michelle Graham. GO Biological Process: RNA methylation SoyBaseN/AISS
GO:0006412GO-bp Annotation by Michelle Graham. GO Biological Process: translation SoyBaseN/AISS
GO:0042254GO-bp Annotation by Michelle Graham. GO Biological Process: ribosome biogenesis SoyBaseN/AISS
GO:0005730GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleolus SoyBaseN/AISS
GO:0005737GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm SoyBaseN/AISS
GO:0005774GO-cc Annotation by Michelle Graham. GO Cellular Compartment: vacuolar membrane SoyBaseN/AISS
GO:0005829GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytosol SoyBaseN/AISS
GO:0009506GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasmodesma SoyBaseN/AISS
GO:0009507GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast SoyBaseN/AISS
GO:0022625GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytosolic large ribosomal subunit SoyBaseN/AISS
GO:0022626GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytosolic ribosome SoyBaseN/AISS
GO:0003735GO-mf Annotation by Michelle Graham. GO Molecular Function: structural constituent of ribosome SoyBaseN/AISS
PTHR23105Panther 60S RIBOSOMAL PROTEIN L10A - RELATED JGI ISS
PTHR23105:SF1Panther 60S RIBOSOMAL PROTEIN L7A JGI ISS
PF01248PFAM Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JGI ISS
UniRef100_I1MAH1UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MAH1_SOYBN SoyBaseE_val: 9.00E-44ISS
UniRef100_Q2VCI3UniRef Annotation by Michelle Graham. Most informative UniRef hit: 60S ribosomal protein L7A-like n=1 Tax=Solanum tuberosum RepID=Q2VCI3_SOLTU SoyBaseE_val: 2.00E-18ISS

Expression Patterns of Glyma14g29145
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g29145 not represented in the dataset
Glyma14g29145 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g29145 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.14g124500 Wm82.a2.v1IGC As supplied by JGI

References for Glyma14g29145
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma14g29145
>Glyma14g29145.1   sequence type=CDS   gene model=Glyma14g29145   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCTCCTAAACGAGGTGGAAAGGCTCCGACTCTTGCCGCTAAGAAGAAGCCTGAGAAGGTTTCGAATCCGTTGTTCGAGAAGCGTCCGAAGCAGGTTGTTGTGATTGCTCACGATGTGGACCCAATTGAATTGGTTGTCTGGCTTCCTGCACTGTACAGGAAGATGGAAATTCCGTATTGTATTGTGAAGGGAAAGGCCCGCTTGGGAACGAGAATACCAGAACTTTTGACTTGA
Predicted protein sequences of Glyma14g29145
>Glyma14g29145.1   sequence type=predicted peptide   gene model=Glyma14g29145   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MAPKRGGKAPTLAAKKKPEKVSNPLFEKRPKQVVVIAHDVDPIELVVWLPALYRKMEIPYCIVKGKARLGTRIPELLT*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo