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Report for Sequence Feature Glyma14g29100

Feature Type:gene_model
Chromosome:Gm14
Start:35787002
stop:35789088
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma14g29100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G56230AT Annotation by Michelle Graham. TAIR10: Protein of unknown function (DUF1399) | chr1:21046111-21048959 REVERSE LENGTH=752 SoyBaseE_val: 1.00E-83ISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0003674GO-mf Annotation by Michelle Graham. GO Molecular Function: molecular function SoyBaseN/AISS
PF07173PFAM Protein of unknown function (DUF1399) JGI ISS
UniRef100_D7M9Z2UniRef Annotation by Michelle Graham. Most informative UniRef hit: Glycine-rich protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7M9Z2_ARALL SoyBaseE_val: 1.00E-17ISS
UniRef100_I1MAG6UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MAG6_SOYBN SoyBaseE_val: 0ISS

Expression Patterns of Glyma14g29100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g29100 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.14g124200 Wm82.a2.v1IGC As supplied by JGI

References for Glyma14g29100
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma14g29100
>Glyma14g29100.1   sequence type=CDS   gene model=Glyma14g29100   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCCTTCGTTCTCGATGCTTCACCACACCCCCATTATGGTGGAAGCCATGAGAAGGTACCATGATTTCTGGATGTCGTTGATTGCTGATCTCATGCTGCCCAACTCTTCCCCTCCCACGATTTTTCCTCCCCTTGACATCCATTGGGTTTGGTTCTGTCACACTTTAAACCTCGTAAGTTACAGGGAATACTGTGAAACGAGATTCTCAAAGCTGATTGGGAAAGCGGGAAACTTTGATGAAGAGAACAGAGAGTACGCGTTGATGTGGTGCAGGGAGATTTGGAGCAGTAGATACCCGTTGGAGTCGTTTGAAACGAGGCGAGTTCGGATTCGTAGGATTTGGATATTGTGTCTGTTTAAGGAACTTGAAAAGCAGAGGGTGTTGTTGTGTTCCATGTTTGTAGAGCCATACAGGTCCGAGGTGGTCTACTTGATAGTTGCGAGACAACGATACAAGGCTTTCTTGTTTATGCTGCTGAGGTTCGCACGTGACTTCTCTTCACGTTTGGTTCCTACTTCGGACATCCTCTTAATGTGGTTGACCCACCAGAGCTACCCAACAGTGTATTGTGAAGATTTGAAAGCATTAGCTATAGAAGGTGATCTGGAGAAGGTGGCAACTCTGTCTGAAAAGGTGAAGGAAAAGGAGTTTGAAGAAACCAAGAAGTTGTGGGATAGGGTGTTCAATCAACCTTATGAGATAGATGGTGGAGAGGTGCCTTTGATGTTGGAGGATGTTATCTCAATCAAATCCCCTATCTATTGGGAGGATTCGGGCACAGATGTAAATACAAAATACAGAATGTTTGAGTTATGTTGTTTACTTATGTTGGATTATGATCATGATTTTATTATCAACAATGAAGATGATAGAAGCTTGAGCCTCCAAGTCCAAAGGAATAATAGTTGTTTTTCACAGAGTGACTCTAATGTTTTTCATTTCACTGGTTGGGTTGGGGGTGGTGTAAAAAGCATTGTTGTCCTCCTTCAGTCCTGTTGGGTGAGTTTTGTCAGATATTTGGGAGAACGAAAAGTAGCATCTTCTGGACCAAGATAG
Predicted protein sequences of Glyma14g29100
>Glyma14g29100.1   sequence type=predicted peptide   gene model=Glyma14g29100   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MPSFSMLHHTPIMVEAMRRYHDFWMSLIADLMLPNSSPPTIFPPLDIHWVWFCHTLNLVSYREYCETRFSKLIGKAGNFDEENREYALMWCREIWSSRYPLESFETRRVRIRRIWILCLFKELEKQRVLLCSMFVEPYRSEVVYLIVARQRYKAFLFMLLRFARDFSSRLVPTSDILLMWLTHQSYPTVYCEDLKALAIEGDLEKVATLSEKVKEKEFEETKKLWDRVFNQPYEIDGGEVPLMLEDVISIKSPIYWEDSGTDVNTKYRMFELCCLLMLDYDHDFIINNEDDRSLSLQVQRNNSCFSQSDSNVFHFTGWVGGGVKSIVVLLQSCWVSFVRYLGERKVASSGPR*






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