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Report for Sequence Feature Glyma14g29081

Feature Type:gene_model
Chromosome:Gm14
Start:35705775
stop:35706173
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma14g29081
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G00550AT Annotation by Michelle Graham. TAIR10: digalactosyl diacylglycerol deficient 2 | chr4:238154-240019 REVERSE LENGTH=473 SoyBaseE_val: 4.00E-47ISS
GO:0000165GO-bp Annotation by Michelle Graham. GO Biological Process: MAPK cascade SoyBaseN/AISS
GO:0001666GO-bp Annotation by Michelle Graham. GO Biological Process: response to hypoxia SoyBaseN/AISS
GO:0006612GO-bp Annotation by Michelle Graham. GO Biological Process: protein targeting to membrane SoyBaseN/AISS
GO:0007154GO-bp Annotation by Michelle Graham. GO Biological Process: cell communication SoyBaseN/AISS
GO:0009058GO-bp Annotation by Michelle Graham. GO Biological Process: biosynthetic process SoyBaseN/AISS
GO:0009247GO-bp Annotation by Michelle Graham. GO Biological Process: glycolipid biosynthetic process SoyBaseN/AISS
GO:0009409GO-bp Annotation by Michelle Graham. GO Biological Process: response to cold SoyBaseN/AISS
GO:0009697GO-bp Annotation by Michelle Graham. GO Biological Process: salicylic acid biosynthetic process SoyBaseN/AISS
GO:0009738GO-bp Annotation by Michelle Graham. GO Biological Process: abscisic acid mediated signaling pathway SoyBaseN/AISS
GO:0009862GO-bp Annotation by Michelle Graham. GO Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway SoyBaseN/AISS
GO:0009863GO-bp Annotation by Michelle Graham. GO Biological Process: salicylic acid mediated signaling pathway SoyBaseN/AISS
GO:0009867GO-bp Annotation by Michelle Graham. GO Biological Process: jasmonic acid mediated signaling pathway SoyBaseN/AISS
GO:0010363GO-bp Annotation by Michelle Graham. GO Biological Process: regulation of plant-type hypersensitive response SoyBaseN/AISS
GO:0016036GO-bp Annotation by Michelle Graham. GO Biological Process: cellular response to phosphate starvation SoyBaseN/AISS
GO:0019375GO-bp Annotation by Michelle Graham. GO Biological Process: galactolipid biosynthetic process SoyBaseN/AISS
GO:0030968GO-bp Annotation by Michelle Graham. GO Biological Process: endoplasmic reticulum unfolded protein response SoyBaseN/AISS
GO:0031348GO-bp Annotation by Michelle Graham. GO Biological Process: negative regulation of defense response SoyBaseN/AISS
GO:0042631GO-bp Annotation by Michelle Graham. GO Biological Process: cellular response to water deprivation SoyBaseN/AISS
GO:0043069GO-bp Annotation by Michelle Graham. GO Biological Process: negative regulation of programmed cell death SoyBaseN/AISS
GO:0045087GO-bp Annotation by Michelle Graham. GO Biological Process: innate immune response SoyBaseN/AISS
GO:0050832GO-bp Annotation by Michelle Graham. GO Biological Process: defense response to fungus SoyBaseN/AISS
GO:0009507GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast SoyBaseN/AISS
GO:0009707GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast outer membrane SoyBaseN/AISS
GO:0008194GO-mf Annotation by Michelle Graham. GO Molecular Function: UDP-glycosyltransferase activity SoyBaseN/AISS
GO:0016757GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups SoyBaseN/AISS
GO:0035250GO-mf Annotation by Michelle Graham. GO Molecular Function: UDP-galactosyltransferase activity SoyBaseN/AISS
GO:0046481GO-mf Annotation by Michelle Graham. GO Molecular Function: digalactosyldiacylglycerol synthase activity SoyBaseN/AISS
PTHR12526Panther GLYCOSYLTRANSFERASE JGI ISS
PTHR12526:SF201Panther SUBFAMILY NOT NAMED JGI ISS
UniRef100_Q6DW75UniRef Annotation by Michelle Graham. Most informative UniRef hit: Digalactosyldiacylglycerol synthase 2, chloroplastic n=1 Tax=Glycine max RepID=DGDG2_SOYBN SoyBaseE_val: 8.00E-55ISS
UniRef100_UPI0002338BC2UniRef Annotation by Michelle Graham. Best UniRef hit: UPI0002338BC2 related cluster n=1 Tax=unknown RepID=UPI0002338BC2 SoyBaseE_val: 3.00E-56ISS

Expression Patterns of Glyma14g29081
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g29081 not represented in the dataset
Glyma14g29081 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g29081 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.14g124100 Wm82.a2.v1IGC As supplied by JGI

References for Glyma14g29081
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma14g29081
>Glyma14g29081.1   sequence type=CDS   gene model=Glyma14g29081   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCAATTTTCTAGAGATAAAAGGAGCAGTCTTGCTGTTGGGGATATTTCGGAGATTATCCCTGACAAAGTTGCAGATATTGCTGTTCTAGAGGAGCCTGAGCACTTGACATGGTATCACCATGGGAAAAGATGGAAGACTAAATTCAGGCTAGTTATAGGGATAATTCATACGAATTATTTGGAGTATGTGAAGAGAGAAAAGAATGGAACCATGCAAGCATTTTTGCTGAAATATTTAAACAGCTGGGTTGTTGGTATATATTGTCACAAGGCAAGTTATTATATCATCATGGAAAATAGTATATATGTAATCAATATTCAAATTAATATTACATTGTTCCACCTAATATAA
Predicted protein sequences of Glyma14g29081
>Glyma14g29081.1   sequence type=predicted peptide   gene model=Glyma14g29081   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MQFSRDKRSSLAVGDISEIIPDKVADIAVLEEPEHLTWYHHGKRWKTKFRLVIGIIHTNYLEYVKREKNGTMQAFLLKYLNSWVVGIYCHKASYYIIMENSIYVINIQINITLFHLI*






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