Glyma14g28160 - SoyBase

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Report for Sequence Feature Glyma14g28160

Feature Type:	gene_model
Chromosome:	Gm14
Start:	34661653
stop:	34662358
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g28160

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
UniRef100_G7I6V2	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Calcium-responsive transactivator n=1 Tax=Medicago truncatula RepID=G7I6V2_MEDTR	SoyBase	E_val: 4.00E-18	ISS
UniRef100_I1MAF4	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MAF4_SOYBN	SoyBase	E_val: 3.00E-121	ISS

Expression Patterns of Glyma14g28160

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g28160 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g122500	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma14g28160

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma14g28160

Limit To All Plant Sequences

>Glyma14g28160.1   sequence type=CDS   gene model=Glyma14g28160   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAGTACCAATGCTGTGTATATGAGACAAAAGATCATGGAGTTGAAGAAGAAGGCAGGGGAAGCCACTACACCCAGTGGTTGTTCATTCATGAACTTGGACAAATTCATTAAGGAGCATCGGATTCTGGCTCCCCTTCTGTTCCTTTTGTTGTGGAACCTATCAAGGCTGCAAAGAAATCTCATGTACCTAGCTGCAATAGCTGATTCTCAACCACAACCATCTCCATTGGCTGGTCAGCCTTTCTCAGTGCTTCAACAGCAGCCAGGCATGCACAACCAACTTGGCATAAGCTCCATTGGACGTCAAGGCCTCCACATGCTGCAAAGTGAAGCCACTAATGTTGGAGGCAATGCAACCATAGGAGCCGGAGGAGGGTTTCCGGACTTTGTACGCATCGGTAGTGGCAAGCAAGATATTGGAATCTCTGGTGAAGGCAGAGGAGGAAACTCTAATGGCCACTCTGGTGATGGTGGTGAGACACTTAATTACCTTAAAGTTGCTGGTGATGGAAGCTGA

Predicted protein sequences of Glyma14g28160

Limit To All Plant Sequences

>Glyma14g28160.1   sequence type=predicted peptide   gene model=Glyma14g28160   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSTNAVYMRQKIMELKKKAGEATTPSGCSFMNLDKFIKEHRILAPLLFLLLWNLSRLQRNLMYLAAIADSQPQPSPLAGQPFSVLQQQPGMHNQLGISSIGRQGLHMLQSEATNVGGNATIGAGGGFPDFVRIGSGKQDIGISGEGRGGNSNGHSGDGGETLNYLKVAGDGS*

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